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owl2_from_rdf_utils.pl
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owl2_from_rdf_utils.pl
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% -----------------------------------------------------------------------
% UTILITY Predicates
% -----------------------------------------------------------------------
%% owl_clear_as
%
% Clears the prolog terms that store the Abstract Syntax
% implementation of the OWL ontology.
owl_clear_as :-
debug(owl_parser,'Clearing abstract syntax',[]),
forall((axiompred(PredSpec),predspec_head(PredSpec,Head)),
retractall(Head)).
predspec_head(Pred/A,Head) :- functor(Head,Pred,A).
u_assert(Term) :-
call(Term), !; assert(Term).
convert(T,V,typed_value(T,V)).
%% rdf_2_owl(+Base, +Ont) is det
%
% Converts RDF triples to OWL/4 triples so that
% their use can tracked by the OWL parser.
rdf_2_owl(Base,Ont) :-
debug(owl_parser, 'Removing existing owl triples',[]),
retractall(owl(_,_,_,Ont)),
debug(owl_parser,'Copying RDF triples to OWL triples',[]),
rdf(X,Y,Z,Base:_),
% owl_fix_no(X,X1), owl_fix_no(Y,Y1), owl_fix_no(Z,Z1),
assert(owl(X,Y,Z,Ont)), fail.
rdf_2_owl(_,Ont) :-
owl_count(Ont,Z),
debug(owl_parser,'Number of owl triples copied: ~w',[Z]).
%% owl_count(?U).
% Returns/Checks the number of unused OWL triples.
owl_count(O,U) :-
findall(1,owl(_,_,_,O),X), length(X,U).
%% expand_and_assert(S,P,O) is det
%
% adds a owl(S,P,O,not_used) after expanding namespaces.
% this is required for the triple replacement rules,
% which use shortened rdfs/owl namespaces.
% (or we could just use the expanded forms here which
% may be faster..)
expand_and_assert(X1,Y1,Z1) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),!,
retractall(owl(X,Y,Z, used1)),
assert(owl(X,Y,Z, not_used)).
%% test_use_owl(+Triples:list) is nondet
%
% As use_owl/1, but does not consume the triple. If owl(S,P,O)
% in Triples has a non-ground variable then this will succeed
% non-deterministically. If all variables are ground, then this
% will succeed semi-deterministically.
test_use_owl([]).
test_use_owl([owl(S,P,O)|Rest]) :-
test_use_owl(S,P,O),
test_use_owl(Rest).
%% test_use_owl(?S,?P,?O)
% As use_owl/3, but does not consume the triple. Expands the S,P,O.
%
% If any of S, P or O is non-ground then this will succeed
% non-deterministically. If all variables are ground, then this
% will succeed semi-deterministically.
test_use_owl(X1,Y1,Z1) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),!,
owl(X,Y,Z, not_used).
test_use_owl(X1,Y1,Z1,named) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),
owl(X,Y,Z, not_used),
not(sub_string(X,0,2,_,'__')).
%% use_owl(+Triples:list)
% Marks a list of OWL triples as used, but only if all match. Expands the S,P,O.
use_owl(Triples) :-
test_use_owl(Triples),
use_owl_2(Triples).
% consume all triples; we have already tested the list and know that all match
use_owl_2([]).
use_owl_2([owl(S,P,O)|Triples]) :-
use_owl(S,P,O),
use_owl_2(Triples).
%% use_owl(?S,?P,?O)
% Marks an OWL triple as used. Expands the S,P,O.
use_owl(X1,Y1,Z1) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),
( X = 'http://www.w3.org/TR/2003/PR-owl-guide-20031209/wine#RedWine', Y = 'http://www.w3.org/2002/07/owl#intersectionOf' ->
print(1),nl ;
true),
owl(X,Y,Z, not_used),
debug(owl_parser_detail,'using ~w ~w ~w',[X,Y,Z]),
retract(owl(X,Y,Z, not_used)),
assert(owl(X,Y,Z,used1)).
%% use_owl(?S,?P,?O,+Named)
%
% Named = named: Same as use_owl/3, but marks only if S is Named URI (i.e. non blank node).
use_owl(X1,Y1,Z1,named) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),
owl(X,Y,Z, not_used),
not(sub_string(X,0,2,_,'__')),
retract(owl(X,Y,Z, not_used)),
assert(owl(X,Y,Z,used2)).
%% use_owl(?S,?P,?O,Term)
%
% Marks an OWL triple as used. Expands the S,P,O.
use_owl(X1,Y1,Z1,Term) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),
owl(X,Y,Z, not_used),
debug(owl_parser_detail,'using ~w ~w ~w',[X,Y,Z]),
retract(owl(X,Y,Z, not_used)),
assert(owl(X,Y,Z,used(Term))).
%% use_owl(?S,?P,?O,+Named,Term)
%
% Named = named: Same as use_owl/3, but marks only if S is Named URI (i.e. non blank node).
use_owl(X1,Y1,Z1,named,Term) :-
expand_ns(X1,X),
expand_ns(Y1,Y),
expand_ns(Z1,Z),
owl(X,Y,Z, not_used),
not(sub_string(X,0,2,_,'__')),
retract(owl(X,Y,Z, not_used)),
assert(owl(X,Y,Z,used(Term))).
%% expand_ns(+NS_URL, ?Full_URL)
%
% Expands a 'namespaced' URI of the form ns:fragment to a full URI
% substituting the full expansion for ns from the ns/2 facts
expand_ns(NS_URL, Full_URL) :-
nonvar(NS_URL),
not(NS_URL = literal(_)),
uri_split(NS_URL,Short_NS,Term, ':'),
rdf_db:ns(Short_NS,Long_NS),!,
concat_atom([Long_NS,Term],Full_URL).
expand_ns(URL, URL).
%% collapse_ns(+FullURL, ?NSURL, +Char, +Options)
%
% Collapses a full URI of the form Path#fragment to a Namespaced
% URI NS:fragment substituting the full expansion for ns from
% the ns/2 facts
% Char is either ':' for normal ns notation or '_' for builing
% prolog terms.
% Options supported: no_base(ShortNs): Use only term!
collapse_ns(FullURL, NSURL,Char,Options) :-
nonvar(FullURL),
not(FullURL = literal(_)),
uri_split(FullURL,LongNS, Term, '#'),
concat(LongNS,'#',LongNS1),
rdf_db:ns(ShortNS,LongNS1),
( member(no_base(ShortNS),Options), ! , NSURL = Term
;
concat_atom([ShortNS,Char,Term],NSURL)
),!.
% CJM
collapse_ns(FullURL, NSURL,_Char,Options) :-
nonvar(FullURL),
not(FullURL = literal(_)),
uri_split(FullURL,LongNS, Term, '#'),
member(no_base(LongNS),Options),
!,
NSURL = Term.
collapse_ns(URL, URL,_,_).
%% uri_split(+URI,-Namespace,-Term,+Split_Char) is det
%
% Splits a URI into the Namespace and the Term parts
% separated by the Split_Char character.
% It supposes URI = concat(Namespace,Split_Char,Term)
uri_split(URI,Namespace,Term,Split_Char) :-
sub_atom(URI,Start,_,After,Split_Char),
sub_atom(URI,0,Start,_,Namespace),
Start1 is Start + 1,
sub_atom(URI,Start1,After,_,Term).
%% owl_collect_linked_nodes(+Node,+Predicate, +InList,-OutList)
% Appends Node to the InList, and recursively, all other
% Nodes that are linked with the Predicate to the Node. The
% result is returned to OutList.
owl_collect_linked_nodes(Node,Predicate,InList,OutList) :-
use_owl(Node,Predicate,A),!,
owl_collect_linked_nodes(Node,Predicate,InList,List1),
owl_collect_linked_nodes(A,Predicate,List1,OutList).
owl_collect_linked_nodes(Node,Predicate,InList,OutList) :-
use_owl(A,Predicate,Node),!,
owl_collect_linked_nodes(Node,Predicate,InList,List1),
owl_collect_linked_nodes(A,Predicate,List1,OutList).
owl_collect_linked_nodes(Node,_,List, [Node|List]) :-
not(memberchk(Node, List)),!.
owl_collect_linked_nodes(_,_,List, List) :- !.
% ----------------------------------------------------------------
% OWL Parser implementation predicates
% ----------------------------------------------------------------
%% owl_get_bnode(+Node,+Description)
%
% if Node is a blank (not named) node, then it is asserted in
% the database as a blanknode(Node,Description,used) term.
% The purpose is to record when a blank node has been used, so
% subsequent uses of it will result in structure sharing.
owl_get_bnode(Node,Description) :-
sub_string(Node,0,2,_,'__'),!,
not( blanknode(Node,_,_)),
assert(blanknode(Node,Description, used)).
owl_get_bnode(_,_).