Fixing bug in corner case of multi variant annotation (#412)

Related-Issue: #412 Projected-Results-Impact: none
varfish-org · Mar 28, 2022 · e7acb2b · e7acb2b
1 parent 614339f
commit e7acb2b
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diff --git a/HISTORY.rst b/HISTORY.rst
@@ -2,6 +2,19 @@
 History / Changelog
 ===================
 
+-----------------
+HEAD (unreleased)
+-----------------
+
+End-User Summary
+================
+
+Full Change List
+================
+
+- Fixing bug in corner case of multi variant annotation (#412)
+
+
 -------
 v01.1.1
 -------

diff --git a/variants/views.py b/variants/views.py
@@ -4123,15 +4123,15 @@ def post(self, *_args, **_kwargs):
 
         for variant in variant_list:
             case = get_object_or_404(Case, sodar_uuid=variant.get("case"))
-            variant_obj = SmallVariant.objects.get(
+            variant_obj = SmallVariant.objects.filter(
                 release=variant.get("release"),
                 chromosome=variant.get("chromosome"),
                 start=variant.get("start"),
                 end=variant.get("end"),
                 reference=variant.get("reference"),
                 alternative=variant.get("alternative"),
                 case_id=case.id,
-            )
+            )[0]
 
             try:
                 flags = case.small_variant_flags.get(