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TODO.md

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TODO

bigdat_grm function

  • create a shared memory matrix (bigmemory) to store/update results from each iteration/batch
    • use a mutex object for synchronization
  • add more info. into computation output
    • the number of filtered SNPs: monomorphic, maf filter, NA
  • add maf_max argument, e.g. jacard for MAF bin [0.001; 0.005]
  • take care when all SNPs are filtered out
  • merge bigdat_jacard into bigdat_grm