v1.0.4

ZephIR v1.0.4

Updated:

• fixed a bug where send_file was calling a deprecated argument
• fixed a bug where an empty dataframe could not be concatenated

v1.0.3

ZephIR v1.0.3

New:

• COMMAND: 'auto_annotate' for automatically annotating a select frame with no linking
• COMMAND: 'train_zephod' for training a ZephOD model

Updated:

• fixed a bug where k_ij could not be properly constructed when nn_max=0
• ZephOD training updated to handle multiple datasets
• ZephOD training updated wth autocast and gradient scaling
• fixed a bug where some ZephOD channel could not process volumes with many z-slices
• fixed a bug where apply_255_lut() could result in NaN's
• fixed a bug where datasets scaled 0-1 was not properly rescaled for ZephOD ops

v1.0.2

ZephIR v1.0.2

New:

• using lr_coef <= 0 skips all distance calculations and sets initial learning rate at lr_floor regardless of distance to parent

Updated:

• using sort_mode = linear builds a partial distance matrix instead of a full one to streamline calculations
• using sort_mode = linear assigns the root of a branch as the reference frame instead of the closest reference frame (previous behavior)
• methods/save_movie places data in the right channel in the movie when using channel
• fixed a bug where parent frames were improperly assigned when using sort_mode = linear with multiple sequential frames in t_ignore
• fixed a bug where update_frame macro did not recompile correctly when using t_track

v1.0.1

ZephIR v1.0.1

New:

• OPTION: t_track specifies a list of frames to analyze; supercedes existing option t_ignore

Updated:

• methods/save_movie only saves reference frames and tracked frames
• methods/save_movie saves all available frames (previous behavior) when include_all=True
• docs/Guide-ZephIR updated with tips on t_track

v1.0.0

Preprint release.