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Deprecate libbdsg odgi #102

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adamnovak opened this issue Mar 15, 2021 · 0 comments
Open

Deprecate libbdsg odgi #102

adamnovak opened this issue Mar 15, 2021 · 0 comments
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The odgi project's "odgi" graph is now substantially different than the libbdsg version, and they've never quite been serialized-data compatible, and the odgi tool wants to use GFA for interchange anyway. Also, libbdsg's odgi has outstanding issues (#19) and isn't really maintained, because all the real odgi graph data structure development happens in the odgi project.

We should deprecate libbdsg's odgi graph implementation.
@adamnovak adamnovak self-assigned this Mar 15, 2021
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