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Can VG simulate the third-generations long reads? #4284
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Although |
Thank you! |
I'm simulating long reads using Do you have any suggestions? |
Looking through our script, it seems that we used the |
@tanger-code If you want to simulate from just one named path in the graph, you can use the But that simulates from just that path; it won't include variants in the graph that leave the embedded path. I don't think we have a way to simulate from the connected component of the graph that contains a path, other than using |
Hi.
Now I have the
.gbz
graph file, and I want to simulate the third-generationslong reads
data from a pangenome graph. Can VG simulate the third-generations long reads? Or if there is some methods to do this?Any advice would be very helpful to me. Thanks.
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