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@scunnac scunnac released this 24 Sep 19:46
· 23 commits to master since this release
v1.1.1
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Learn about vigilant mode.
  • updated documentation
  • implemented an automatic download of latest singularity containers (guppy 6.3.7) with https URL of files on Drive IRD
  • read id list for splitting fast5 files into genome bins is now created with the R script that handles creating genome specific fastq files. Hopefully, this solve occasional problems with fast5_subset from the ont api that failled because of supposedly too long read names. Will ultimately use the ONT POD5 format and tools.
  • python scripts interface clarified between slurm and cluster. Documentation indicates that only local and slurm modes will be kept for configure
  • created after merge of XoCo branch #5
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