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  • Columbia DBMI
  • New York, New York

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Achievements

Achievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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  1. ocular_transcriptomes_pipeline ocular_transcriptomes_pipeline Public

    A Snakemake pipeline for constructing de novo*transcriptomes from the EiaD dataset

    R 4 1

  2. ocular_transcriptomes_paper ocular_transcriptomes_paper Public

    Code to create paper "A short-read de novo transcriptome construction pipeline optimized by long reads reveals novel developmentally regulated gene isoforms and disease targets in hundreds of eye s…

    HTML 2

  3. BIOF076-Visualization-with-R BIOF076-Visualization-with-R Public

    Course website for BIOF076

    HTML 1 3

  4. makeRandomPlaylistSpotify makeRandomPlaylistSpotify Public

    a python script to make a Spotify playlist from a random sample of a users saved songs

    Python 1 1

  5. davemcg/scEiaD davemcg/scEiaD Public

    Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas

    Jupyter Notebook 23 4

  6. clustereval clustereval Public

    evaluation of approximate nearest neighbor graph based clustering

    Python