Release to Update Site #21
Workflow file for this run
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| name: Release to Update Site | |
| # https://imagej.net/update-sites/automatic-uploads | |
| # https://github.com/saalfeldlab/n5-ij/tree/master/.github | |
| # https://imagej.net/update-sites/setup#creating-a-hosted-update-site | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| module: | |
| description: Module to deploy as an ImageJ plugin | |
| required: true | |
| default: 'view-simulation-results' | |
| username: | |
| description: Username of IJ user deploying | |
| required: true | |
| default: 'vcell' | |
| password: | |
| description: Password for the user deploying | |
| required: true | |
| update_site: | |
| description: The endpoint which hosts the available plugin | |
| required: true | |
| default: 'VCell-Simulations-Result-Viewer' | |
| jobs: | |
| build_release: | |
| runs-on: ubuntu-latest | |
| env: | |
| IJ_DOWNLOAD_URL: https://downloads.imagej.net/fiji/latest/fiji-linux64.zip | |
| WIKI_USER: ${{ github.event.inputs.username }} | |
| UPDATE_PASS: ${{ secrets.VCELL_UPLOAD_PASSWORD }} | |
| UPDATE_SITE: ${{ github.event.inputs.update_site }} | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up JDK 8 | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '8' | |
| distribution: 'temurin' | |
| cache: maven | |
| - name: Build with Maven | |
| run: 'mvn -B -pl org.vcell.vcellfiji:${{ github.event.inputs.module }} -DskipTests=True package' # Skip tests, cause for concern see if there is way to do some form of composition with workflows | |
| - name: Install ImageJ/Fiji | |
| run: | | |
| curl --silent -O ${IJ_DOWNLOAD_URL} | |
| unzip fiji-linux64.zip | |
| ./Fiji.app/ImageJ-linux64 --headless --update edit-update-site ${UPDATE_SITE} https://sites.imagej.net/${UPDATE_SITE}/ "webdav:${WIKI_USER}:${UPDATE_PASS}" . | |
| - name: Install in ImageJ/Fiji (with Maven) | |
| run: mvn -B -pl org.vcell.vcellfiji:${{ github.event.inputs.module }} install -Dscijava.app.directory=./Fiji.app -Ddelete.other.versions=true -Dscijava.ignoreDependencies=true -DskipTests=True #Skip tests | |
| - name: Release to ImageJ update site | |
| run: | | |
| ./Fiji.app/ImageJ-linux64 --headless --update upload-complete-site --force ${UPDATE_SITE} |