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vital-ai/vital-cytoscape

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vital-cytoscape

vital endpoint plugin for cytoscape

Requirements:

  • maven
  • Vital AI software with $VITAL_HOME environment variable set

Check the release branch for any recent differences. Current active branch is: rel-0.2.300

Build and package

mvn clean package

the plugin jar will be available at <project.root>/target/vital-cytoscape-.jar

Notes:

  • Uses a VitalService implementation as the storage/query/computation backend
  • VitalService LuceneMemory is available, but only ephemoral
  • VitalService LuceneDisk is available
  • VitalService DynamoDB is available
  • VitalService SparQL is available
  • VitalService SQL is available
  • VitalService IndexDB is available
  • VitalService VitalPrime is available
  • The VitalPrime implementation makes available DataScripts such that computation can occur in a cluster.