removing travis support #ragequit. it wasn't that helpful anyway beca…

…use can't test models without waiting a long time. updating doc structure.

README.rst

@@ -1,7 +1,3 @@
-.. image:: https://travis-ci.org/vitruvianscience/OpenDeep.svg?branch=master
-    :target: https://travis-ci.org/vitruvianscience/OpenDeep
-    :alt: Build Status
-
 .. image:: https://readthedocs.org/projects/opendeep/badge/?version=latest
     :target: https://readthedocs.org/projects/opendeep/?badge=latest
     :alt: Documentation Status

docs/source/opendeep.models.multi_layer.tests.rst

@@ -4,42 +4,42 @@ opendeep.models.multi_layer.tests package
 Submodules
 ----------
 
-opendeep.models.multi_layer.tests.test_gsn module
--------------------------------------------------
+opendeep.models.multi_layer.tests.gsn_mnist module
+--------------------------------------------------
 
-.. automodule:: opendeep.models.multi_layer.tests.test_gsn
+.. automodule:: opendeep.models.multi_layer.tests.gsn_mnist
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.multi_layer.tests.test_rnngsn_midi module
----------------------------------------------------------
+opendeep.models.multi_layer.tests.rnngsn_midi module
+----------------------------------------------------
 
-.. automodule:: opendeep.models.multi_layer.tests.test_rnngsn_midi
+.. automodule:: opendeep.models.multi_layer.tests.rnngsn_midi
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.multi_layer.tests.test_rnngsn_mnist module
-----------------------------------------------------------
+opendeep.models.multi_layer.tests.rnngsn_mnist module
+-----------------------------------------------------
 
-.. automodule:: opendeep.models.multi_layer.tests.test_rnngsn_mnist
+.. automodule:: opendeep.models.multi_layer.tests.rnngsn_mnist
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.multi_layer.tests.test_rnnrbm_midi module
----------------------------------------------------------
+opendeep.models.multi_layer.tests.rnnrbm_midi module
+----------------------------------------------------
 
-.. automodule:: opendeep.models.multi_layer.tests.test_rnnrbm_midi
+.. automodule:: opendeep.models.multi_layer.tests.rnnrbm_midi
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.multi_layer.tests.test_rnnrbm_mnist module
-----------------------------------------------------------
+opendeep.models.multi_layer.tests.rnnrbm_mnist module
+-----------------------------------------------------
 
-.. automodule:: opendeep.models.multi_layer.tests.test_rnnrbm_mnist
+.. automodule:: opendeep.models.multi_layer.tests.rnnrbm_mnist
     :members:
     :undoc-members:
     :show-inheritance:

docs/source/opendeep.models.single_layer.tests.rst

@@ -4,34 +4,34 @@ opendeep.models.single_layer.tests package
 Submodules
 ----------
 
-opendeep.models.single_layer.tests.test_autoencoder module
-----------------------------------------------------------
+opendeep.models.single_layer.tests.autoencoder_mnist module
+-----------------------------------------------------------
 
-.. automodule:: opendeep.models.single_layer.tests.test_autoencoder
+.. automodule:: opendeep.models.single_layer.tests.autoencoder_mnist
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.single_layer.tests.test_basic_mlp module
---------------------------------------------------------
+opendeep.models.single_layer.tests.basic_mlp_mnist module
+---------------------------------------------------------
 
-.. automodule:: opendeep.models.single_layer.tests.test_basic_mlp
+.. automodule:: opendeep.models.single_layer.tests.basic_mlp_mnist
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.single_layer.tests.test_rbm module
---------------------------------------------------
+opendeep.models.single_layer.tests.rbm_mnist module
+---------------------------------------------------
 
-.. automodule:: opendeep.models.single_layer.tests.test_rbm
+.. automodule:: opendeep.models.single_layer.tests.rbm_mnist
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.models.single_layer.tests.test_softmax module
-------------------------------------------------------
+opendeep.models.single_layer.tests.softmax_mnist module
+-------------------------------------------------------
 
-.. automodule:: opendeep.models.single_layer.tests.test_softmax
+.. automodule:: opendeep.models.single_layer.tests.softmax_mnist
     :members:
     :undoc-members:
     :show-inheritance:

docs/source/opendeep.models.tests.rst

@@ -4,10 +4,10 @@ opendeep.models.tests package
 Submodules
 ----------
 
-opendeep.models.tests.test_prototype module
--------------------------------------------
+opendeep.models.tests.prototype_mnist module
+--------------------------------------------
 
-.. automodule:: opendeep.models.tests.test_prototype
+.. automodule:: opendeep.models.tests.prototype_mnist
     :members:
     :undoc-members:
     :show-inheritance:

docs/source/opendeep.monitor.tests.rst

@@ -4,18 +4,18 @@ opendeep.monitor.tests package
 Submodules
 ----------
 
-opendeep.monitor.tests.test_fileservice module
-----------------------------------------------
+opendeep.monitor.tests.monitor_bokeh_server module
+--------------------------------------------------
 
-.. automodule:: opendeep.monitor.tests.test_fileservice
+.. automodule:: opendeep.monitor.tests.monitor_bokeh_server
     :members:
     :undoc-members:
     :show-inheritance:
 
-opendeep.monitor.tests.test_monitor module
-------------------------------------------
+opendeep.monitor.tests.test_fileservice module
+----------------------------------------------
 
-.. automodule:: opendeep.monitor.tests.test_monitor
+.. automodule:: opendeep.monitor.tests.test_fileservice
     :members:
     :undoc-members:
     :show-inheritance:

docs/source/opendeep.optimization.log_likelihood.tests.rst

@@ -4,10 +4,10 @@ opendeep.optimization.log_likelihood.tests package
 Submodules
 ----------
 
-opendeep.optimization.log_likelihood.tests.test_csl module
+opendeep.optimization.log_likelihood.tests.csl_test module
 ----------------------------------------------------------
 
-.. automodule:: opendeep.optimization.log_likelihood.tests.test_csl
+.. automodule:: opendeep.optimization.log_likelihood.tests.csl_test
     :members:
     :undoc-members:
     :show-inheritance:

opendeep/utils/activation.py

@@ -38,10 +38,10 @@ def sigmoid(x):
 
         You might want to try T.nnet.ultra_fast_sigmoid() or T.nnet.hard_sigmoid() for faster versions.
         Speed comparison for 100M float64 elements on a Core2 Duo @ 3.16 GHz:
-            hard_sigmoid: 1.0s
-            ultra_fast_sigmoid: 1.3s
-            sigmoid (with amdlibm): 2.3s
-            sigmoid (without amdlibm): 3.7s
+        hard_sigmoid: 1.0s
+        ultra_fast_sigmoid: 1.3s
+        sigmoid (with amdlibm): 2.3s
+        sigmoid (without amdlibm): 3.7s
 
         Precision: sigmoid(without or without amdlibm) > ultra_fast_sigmoid > hard_sigmoid.