cuda 8.0 | cudnn 6.0 | nnconv_cudnn.cu: error: too few arguments in function call #937

xwguo · 2017-03-30T13:52:23Z

I am using ubuntu 16.04, matlab 2017a, cudnn 6.0, GTX 1070, cuda 8.0, g++/gcc 5.4.

I could do the vl_compilenn and vl_compilenn with gpu but without cudnn support.
The only error I got is from vl_compilenn with cudnn enable, as shown in below.

Besides, I could compile for all three ways with cudnn-rc4, but when it comes to vl_testnn, there would be lots of missing symbols.

error message with vl_compilenn enable cudnn-6:

/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/src/bits/impl/nnconv_cudnn.cu(137): error: too few arguments in function call

/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/src/bits/impl/nnconv_cudnn.cu(356): error: too few arguments in function call

2 errors detected in the compilation of "/tmp/tmpxft_000076fb_00000000-7_nnconv_cudnn.cpp1.ii".
Error using vl_compilenn>nvcc_compile (line 540)
Command "/usr/local/cuda-8.0/bin/nvcc" -c
"/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/src/bits/impl/nnconv_cudnn.cu"
-DNDEBUG -DENABLE_GPU -DENABLE_CUDNN -I"/usr/local/cuda-8.0/cudnn-6/include" -DENABLE_DOUBLE
-gencode=arch=compute_61,code="sm_61,compute_61" -I"/home/emily/Documents/FYP/R2017a/extern/include"
-I"/home/emily/Documents/FYP/R2017a/toolbox/distcomp/gpu/extern/include" -Xcompiler
-mssse3,-ftree-vect-loop-version,-ffast-math,-funroll-all-loops
-gencode=arch=compute_61,code="sm_61,compute_61" -O3 -Xcompiler -fPIC -D_FORCE_INLINES -o
"/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/.build/bits/impl/nnconv_cudnn.o"
failed.

Error in vl_compilenn (line 485)
nvcc_compile(opts, srcs{i}, objfile, flags.nvcc)

error message with cudnn-rc4 while doing vl_testnn:

Error occurred in nnbilinearsampler[dataType=single,device=cpu]/check_der_x(ih=value1,iw=value1,oh=value1,ow=value1,multiple_grids=value1) and it did not run to completion.
---------
Error ID:
---------
'MATLAB:mex:ErrInvalidMEXFile'
--------------
Error Details:
--------------
Invalid MEX-fileError occurred in nnbilinearsampler[dataType=single,device=cpu]/check_der_x(ih=value1,iw=value1,oh=value1,ow=value1,multiple_grids=value1) and it did not run to completion.

---------
Error ID:
---------
'MATLAB:mex:ErrInvalidMEXFile'

--------------
Error Details:
--------------
Invalid MEX-file
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64':
Missing symbol '_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE7reserveEm' required by
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64':
Missing symbol '_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE7reserveEm' required by blabalbla a whole bunch of them...

The text was updated successfully, but these errors were encountered:

xwguo · 2017-03-30T13:54:43Z

Anyone has any idea how to fix this? Or which version should I switch to?
I would really appreciate your help!

lenck · 2017-03-30T14:00:18Z

Hi, we haven't implemented the cudnn 6.0 support yet, as it has been released few days back... But it should work with cudnn 5.1 just fine...

…

On 30 March 2017 at 14:54, xwguo ***@***.***> wrote: Anyone has any idea how to fix this? Or which version should I switch to? I would really appreciate your help! — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#937 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABe3FYUiM0ilnou4b8ULW8JOc9T-8jFsks5rq7QkgaJpZM4MuY-3> .

xwguo · 2017-03-30T14:13:22Z

@lenck Thanks a lot for your prompt reply. It compiles with 5.1!
However, when trying vl_testnn, I am still getting those missing symbol error. How can I solve this?

I did add export LD_LIBRARY_PATH="/usr/local/cuda-8.0/cudnn-5.1/lib64:$LD_LIBRARY_PATH" to .bashrc and follow all other instructions on the installing page...

echo $LD_LIBRARY_PATH^ shows
/usr/local/cuda-8.0/cudnn-5.1/lib64:/usr/local/cuda-8.0/lib64:^

Error occurred in nnbilinearsampler[dataType=single,device=cpu]/check_der_x(ih=value1,iw=value1,oh=value1,ow=value1,multiple_grids=value1) and it did not run to completion.
---------
Error ID:
---------
'MATLAB:mex:ErrInvalidMEXFile'
--------------
Error Details:
--------------
Invalid MEX-file
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64':
Missing symbol '_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE7reserveEm' required by
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64'
Missing symbol '_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE9_M_appendEPKcm' required by
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64'
Missing symbol 'ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE9_M_assignERKS4' required by
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64'
Missing symbol '_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE9_M_createERmm' required by
'/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64'
Missing symbol 'GOMP_critical_end' required by
'/home/emily/Documents/FYP/R2017a/bin/glnxa64/libcusolver.so.8.0->/home/emily/Documents/FYP/R2017a/bin/glnxa64/libmwgpucompiler.so->/home/emily/Documents/FYP/R2017a/bin/glnxa64/libmwgpu.so->/home/emily/Documents/FYP/fayao_3_30/libs/matconvnet-1.0-beta24/matlab/mex/vl_nnbilinearsampler.mexa64'
..........

Thanks a lot!!!

unvisualism · 2017-04-17T22:27:11Z

I ran across the same problem, also with using ubuntu 16.04, matlab 2017a, cudnn 6.0, GTX 1070, cuda 8.0, g++/gcc 5.4.

I did try downgrading to cudnn 5.1 and g++/gxx 4.9, which didn't change anything.

I found a solution here: https://groups.google.com/forum/#!topic/caffe-users/aoJdbIxT_PE

The suggestion was to have the needed libraries preload:
export LD_PRELOAD=/usr/lib/x86_64-linux-gnu/libstdc++.so.6:/usr/local/cuda-8.0/lib64/libcudart.so.8.0:/usr/local/cuda-8.0/lib64/libcublas.so.8.0:/usr/lib/x86_64-linux-gnu/libprotobuf.so.9

daa233 · 2017-04-29T12:51:39Z

Thank @unvisualism ! I had the same problem with ubuntu 16.04, matlab 2017a, g++/gcc 5.4 and without GPU. I add the following content in ~/.bashrc and fixed the problem.

export LD_PRELOAD=$LD_PRELOAD:/usr/lib/x86_64-linux-gnu/libstdc++.so.6:/usr/lib/x86_64-linux-gnu/libprotobuf.so.9

By the way, don't forget to execute source ~/.bashrc in the terminal to make the changes work immediately.

ghost · 2017-06-19T16:43:57Z

Hi I wonder if cudnn 6.0 support have been implemented or not.

hoangcuong2011 · 2017-08-14T08:49:26Z

Thanks @daa233. This works for me!

lenck · 2017-08-14T09:39:23Z

Hi, the cudnn v6.0 and v7.0 support will be in the next release which should be coming out in few days...

Sorry that it took so long. There were just few minor changes needed to fix it...

v18saboo · 2017-10-08T21:11:30Z

Hi, I'm getting the same error on Windows. How can I preload those libraries on Windows?

ghost · 2017-10-08T21:16:54Z

I don’t know how you would do it on Windows, I’m sorry.

…

On Oct 8, 2017, at 5:11 PM, varunsaboo ***@***.***> wrote: Hi, I'm getting the same error on Windows. How can I preload those libraries on Windows? — You are receiving this because you commented. Reply to this email directly, view it on GitHub, or mute the thread.

autocyz · 2018-01-25T11:00:45Z

I have the same error on Ubuntu16.04, GCC5.5. I also try @daa233 's solution, but it doesn't work for me.
Fortunately, I handle it by executing these commands:

cd /usr/local/MATLAB2017/sys/os/glnxa64  #where I installed my matlab
sudo mv libstdc++.so.6.0.20 libstdc++.so.6.0.20_bak
sudo mv libstdc++.so.6 libstdc++.so.6_bak
sudo ln -sf /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.24 ./
sudo ln -sf ./libstdc++.so.6.0.24 ./libstdc++.so.6

This was referenced Apr 29, 2017

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cuda 8.0 | cudnn 6.0 | nnconv_cudnn.cu: error: too few arguments in function call #937

cuda 8.0 | cudnn 6.0 | nnconv_cudnn.cu: error: too few arguments in function call #937

xwguo commented Mar 30, 2017

xwguo commented Mar 30, 2017

lenck commented Mar 30, 2017 via email

xwguo commented Mar 30, 2017 •

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unvisualism commented Apr 17, 2017

daa233 commented Apr 29, 2017 •

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ghost commented Jun 19, 2017

hoangcuong2011 commented Aug 14, 2017

lenck commented Aug 14, 2017

v18saboo commented Oct 8, 2017

ghost commented Oct 8, 2017 via email

autocyz commented Jan 25, 2018

cuda 8.0 | cudnn 6.0 | nnconv_cudnn.cu: error: too few arguments in function call #937

cuda 8.0 | cudnn 6.0 | nnconv_cudnn.cu: error: too few arguments in function call #937

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xwguo commented Mar 30, 2017

xwguo commented Mar 30, 2017

lenck commented Mar 30, 2017 via email

xwguo commented Mar 30, 2017 • edited Loading

unvisualism commented Apr 17, 2017

daa233 commented Apr 29, 2017 • edited Loading

ghost commented Jun 19, 2017

hoangcuong2011 commented Aug 14, 2017

lenck commented Aug 14, 2017

v18saboo commented Oct 8, 2017

ghost commented Oct 8, 2017 via email

autocyz commented Jan 25, 2018

xwguo commented Mar 30, 2017 •

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daa233 commented Apr 29, 2017 •

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