Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
0 parents
commit 0469341
Showing
18 changed files
with
702 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,15 @@ | ||
# Compiled python modules. | ||
*.pyc | ||
|
||
# Setuptools distribution folder. | ||
/dist/ | ||
|
||
# Python egg metadata, regenerated from source files by setuptools. | ||
/*.egg-info | ||
/*.egg | ||
|
||
# Jupyter lab checkpoints. | ||
.ipynb_checkpoints | ||
|
||
# Pytest cache | ||
.pytest_cache |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,21 @@ | ||
MIT License | ||
|
||
Copyright (c) 2018 Vincent Lunot | ||
|
||
Permission is hereby granted, free of charge, to any person obtaining a copy | ||
of this software and associated documentation files (the "Software"), to deal | ||
in the Software without restriction, including without limitation the rights | ||
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | ||
copies of the Software, and to permit persons to whom the Software is | ||
furnished to do so, subject to the following conditions: | ||
|
||
The above copyright notice and this permission notice shall be included in all | ||
copies or substantial portions of the Software. | ||
|
||
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE | ||
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE | ||
SOFTWARE. |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,2 @@ | ||
include README.md | ||
include LICENSE.txt |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,56 @@ | ||
# nb2hugo | ||
|
||
*nb2hugo* is a simple way to convert a Jupyter notebook to a Hugo markdown page. | ||
|
||
|
||
## Motivation | ||
|
||
Jupyter Notebook is a great way to create a single document that contains code that can be executed, formatted text to provide detailed explanations, as well as figures. Hugo is a simple yet very powerful static site generator. While a few solutions to convert a Jupyter notebook to a Hugo markdown with front matter already exist, *nb2hugo* put an emphasis on getting a result that looks similar to the original Jupyter notebook. | ||
|
||
|
||
## Installation | ||
|
||
Using pip: | ||
``` | ||
pip install nb2hugo | ||
``` | ||
|
||
|
||
## Usage | ||
|
||
In your python notebook, start by using one or more markdown cells that will contain the front matter information. Next, add an html comment as a front matter divider: everything in the notebook before the End Of Front Matter divider `<!--eofm-->` will be the front matter. This approach is similar to the one used for [content summaries](https://gohugo.io/content-management/summaries/). | ||
A markdown title before the `<!--eofm-->` divider will automatically become the front matter title. You can also provide other front matter fields by writting pairs of "key: value" on different lines. | ||
Below is an example of a notebook markdown cell that will become a front matter: | ||
|
||
```text | ||
# My notebook title | ||
Date: 2018-06-01 | ||
Author: firstname lastname | ||
Categories: category1, category2 | ||
Tags: tag1, tag2, tag3 | ||
<!--eofm--> | ||
``` | ||
|
||
All content after the `<!--eofm-->` divider will be considered as normal notebook content. | ||
|
||
Once you have finished writing your notebook, you can convert it using the following command: | ||
|
||
```bash | ||
nb2hugo notebook_file --site-dir hugo_website_directory --section content_section | ||
``` | ||
|
||
|
||
## Author | ||
|
||
**Vincent Lunot** - *Initial work* | ||
|
||
|
||
## License | ||
|
||
This project is licensed under the MIT License - see the [LICENSE.txt](LICENSE.txt) file for details. | ||
|
||
|
||
## Acknowledgements | ||
|
||
*nb2hugo* is based on [nbconvert](https://github.com/jupyter/nbconvert) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,27 @@ | ||
#!/usr/bin/env python3 | ||
# -*- coding: utf-8 -*- | ||
|
||
import argparse | ||
import os | ||
from nb2hugo.writer import HugoWriter | ||
|
||
|
||
def parse_arguments(): | ||
"""Define and parse the script arguments.""" | ||
parser = argparse.ArgumentParser() | ||
parser.add_argument('notebook', help='Jupyter notebook filename') | ||
parser.add_argument('--site-dir', required=True, | ||
help='path to hugo site directory') | ||
parser.add_argument('--section', required=True, | ||
help='content section where to create markdown') | ||
args = parser.parse_args() | ||
_, ext = os.path.splitext(os.path.basename(args.notebook)) | ||
if ext != '.ipynb': | ||
parser.error('Notebook is expected to have a .ipynb extension.') | ||
return args.notebook, args.site_dir, args.section | ||
|
||
|
||
if __name__ == '__main__': | ||
notebook, site_dir, section = parse_arguments() | ||
writer = HugoWriter() | ||
writer.convert(notebook, site_dir, section) |
Empty file.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,18 @@ | ||
from nbconvert.exporters import MarkdownExporter | ||
from traitlets import List | ||
from .preprocessors import (FrontMatterPreprocessor, FixLatexPreprocessor, | ||
ImagesPreprocessor, RawPreprocessor) | ||
|
||
class HugoExporter(MarkdownExporter): | ||
"""Export a Jupyter notebook to a pair of markdown and resources | ||
compatible with Hugo. | ||
""" | ||
|
||
preprocessors = List([ | ||
FrontMatterPreprocessor, | ||
FixLatexPreprocessor, | ||
RawPreprocessor, | ||
ImagesPreprocessor, | ||
], | ||
help="""List of preprocessors, by name or namespace, to enable.""" | ||
).tag(config=True) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,4 @@ | ||
from .fixlatex import FixLatexPreprocessor | ||
from .frontmatter import FrontMatterPreprocessor | ||
from .images import ImagesPreprocessor | ||
from .raw import RawPreprocessor |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,59 @@ | ||
from nbconvert.preprocessors import Preprocessor | ||
import re | ||
|
||
|
||
class FixLatexPreprocessor(Preprocessor): | ||
"""Preprocess the notebook markdown cells: | ||
- convert $$ ... $$ to \\[ ... \\], | ||
- convert $ ... $ to \\( ... \\), | ||
- double escape underscores inside latex content. | ||
See https://gohugo.io/content-management/formats/#issues-with-markdown | ||
for some issues with latex. | ||
""" | ||
|
||
def preprocess_cell(self, cell, resources, index): | ||
"""Preprocess a notebook cell.""" | ||
if cell.cell_type == "markdown": | ||
cell.source = self._replace_latex_enclosing_dollars(cell.source) | ||
cell.source = self._fix_latex_antislash(cell.source) | ||
return cell, resources | ||
|
||
def _replace_latex_enclosing_dollars(self, text): | ||
"""Convert LaTeX $ ... $ or $$ ... $$ expressions to respectively | ||
\\( ... \\) and \\[ ... \\]. | ||
""" | ||
single_dollar_latex = r'(?<![\\\$])\$(?!\$)(.+?)(?<![\\\$])\$(?!\$)' | ||
to_parentheses = lambda m: r'\\(' + m.group(1) + r'\\)' | ||
no_single_dollar = re.sub(single_dollar_latex, to_parentheses, text, | ||
flags=re.S) | ||
double_dollar_latex = r'\$\$(.+?)\$\$' | ||
to_brackets = lambda m: r'\\[' + m.group(1) + r'\\]' | ||
no_single_or_double_dollar = re.sub(double_dollar_latex, to_brackets, | ||
no_single_dollar, flags=re.S) | ||
return no_single_or_double_dollar | ||
|
||
def _fix_latex_escaped_underscores(self, text): | ||
"""Replace '\_' by '\\_' inside LaTeX expressions delimited by | ||
\\[ ... \\] or \\( ... \\).""" | ||
inline_math = r'\\\((.+?)\\\)' | ||
display_math = r'\\\[(.+?)\\\]' | ||
double_escape = lambda m: re.sub(r'(?<!\\)\\_', r'\\\\_', m.group(0)) | ||
new_text = re.sub(inline_math, double_escape, text, flags=re.S) | ||
new_text = re.sub(display_math, double_escape, new_text, flags=re.S) | ||
return new_text | ||
|
||
def _fix_latex_antislash(self, text): | ||
"""Replace '\\' by '\\\\\\' and '\' by '\\' inside LaTeX expressions | ||
delimited by \\[ ... \\] or \\( ... \\).""" | ||
inline_math = r'\\\\\((.+?)\\\\\)' | ||
display_math = r'\\\\\[(.+?)\\\\\]' | ||
multiple_escape = lambda m: r'\\(' + re.sub(r'\\\\', r'\\\\\\\\\\', m.group(1)) + r'\\)' | ||
new_text = re.sub(inline_math, multiple_escape, text, flags=re.S) | ||
multiple_escape = lambda m: r'\\[' + re.sub(r'\\\\', r'\\\\\\\\\\', m.group(1)) + r'\\]' | ||
new_text = re.sub(display_math, multiple_escape, new_text, flags=re.S) | ||
double_escape = lambda m: r'\\(' + re.sub(r'(?<!\\)\\(?!\\)', r'\\\\', m.group(1)) + r'\\)' | ||
new_text = re.sub(inline_math, double_escape, new_text, flags=re.S) | ||
double_escape = lambda m: r'\\[' + re.sub(r'(?<!\\)\\(?!\\)', r'\\\\', m.group(1)) + r'\\]' | ||
new_text = re.sub(display_math, double_escape, new_text, flags=re.S) | ||
return new_text |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,80 @@ | ||
from nbconvert.preprocessors import Preprocessor | ||
from nbformat import notebooknode | ||
import warnings | ||
|
||
|
||
class FrontMatterPreprocessor(Preprocessor): | ||
"""Preprocess the notebook front matter: | ||
- all the markdown cells before a <!--eofm--> divider | ||
will be considered as part of the front matter and transformed | ||
into a unique cell containing a toml front matter | ||
- all raw cells or code cells before the <!--eofm--> divider will | ||
be removed | ||
- all cells after the <!--eofm--> divider will be kept as is. | ||
""" | ||
|
||
def preprocess(self, nb, resources): | ||
"""Execute the preprocessing of the notebook.""" | ||
frontmatter, content_cells = self._split_frontmatter(nb) | ||
nb.cells = [] | ||
if frontmatter: | ||
toml_fm = self._toml_frontmatter(frontmatter) | ||
nb.cells.append(self._markdown_cell(toml_fm)) | ||
nb.cells += content_cells | ||
return nb, resources | ||
|
||
def _split_frontmatter(self, nb): | ||
"""Return a pair whose first element is a string containing | ||
the frontmatter and whose second element is a list of all the | ||
content cells.""" | ||
frontmatter = '' | ||
for index, cell in enumerate(nb.cells): | ||
if cell.cell_type == "markdown": | ||
split = cell.source.split('<!--eofm-->', 1) | ||
if len(split) > 1: # eofm divider is in the cell | ||
fm_part, content_part = split | ||
frontmatter += fm_part | ||
if content_part.strip(): | ||
first_content_cell = [self._markdown_cell(content_part)] | ||
else: | ||
first_content_cell = [] | ||
return frontmatter, first_content_cell+nb.cells[index + 1:] | ||
else: | ||
# the entire cell content is part of the front matter | ||
frontmatter += cell.source | ||
warnings.warn('Notebook does not have a front matter.') | ||
return '', nb.cells | ||
|
||
def _toml_frontmatter(self, nb_fm): | ||
"""Convert a notebook front matter into a toml front matter. | ||
Example: | ||
>>> toml_frontmatter('# Notebook title\nDate: 2018-06-10') | ||
'+++\ntitle = "Notebook title"\ndate = "2018-06-10"\n+++\n' | ||
""" | ||
toml_fm = '+++\n' | ||
for line in nb_fm.split('\n'): | ||
stripped = line.strip() | ||
if stripped: | ||
if stripped.startswith('# '): # The line contains the title | ||
toml_fm += 'title = "' + stripped[2:].strip() + '"\n' | ||
else: # The line is expected to contain a field "key: value0, value1, ..." | ||
s = stripped.split(':', 1) | ||
if len(s) < 2: | ||
warnings.warn(f'This content is not formatted correctly and is ignored: {stripped}') | ||
continue | ||
key, values = s | ||
key = key.lower() | ||
values = [value.strip() for value in values.split(',')] | ||
if len(values) > 1: # The field has multiple values (e.g. multiple tags) | ||
toml_fm += key + ' = [' + ', '.join([f'"{value.strip()}"' for value in values]) + ']\n' | ||
else: # The field has a single value (e.g. date) | ||
toml_fm += f'{key} = "{values[0]}"\n' | ||
toml_fm += '+++\n' | ||
return toml_fm | ||
|
||
def _markdown_cell(self, source): | ||
"""Create a markdown cell with source content.""" | ||
return notebooknode.from_dict({"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": source}) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,38 @@ | ||
from nbconvert.preprocessors import Preprocessor | ||
import re | ||
import os | ||
import urllib.request | ||
|
||
|
||
class ImagesPreprocessor(Preprocessor): | ||
"""Preprocess the notebook markdown cells: | ||
- copy images to static directory, | ||
- update image link. | ||
""" | ||
|
||
def preprocess(self, nb, resources): | ||
"""Preprocess the entire notebook.""" | ||
if not 'images_path' in resources: | ||
resources['images_path'] = {} | ||
for index, cell in enumerate(nb.cells): | ||
nb.cells[index], resources = self.preprocess_cell(cell, resources, index) | ||
return nb, resources | ||
|
||
def preprocess_cell(self, cell, resources, index): | ||
"""Preprocess one cell.""" | ||
if cell.cell_type == "markdown": | ||
# Find and process links: | ||
process_match = lambda m: self._process_image_link(m.group(1), m.group(2), resources) | ||
cell.source = re.sub('!\[([^"]*?)\]\(([^"]+?)\)', process_match, cell.source) | ||
return cell, resources | ||
|
||
def _process_image_link(self, alt_text, url, resources): | ||
"""Copy image and return updated link.""" | ||
url_as_path = os.path.join(resources['metadata']['path'], url) | ||
if os.path.isfile(url_as_path): | ||
filename = os.path.basename(url) | ||
resources['images_path'][filename] = url_as_path | ||
link = '![' + alt_text + '](' + filename + ')' | ||
else: | ||
link = '![' + alt_text + '](' + url + ')' | ||
return link |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,10 @@ | ||
from nbconvert.preprocessors import Preprocessor | ||
|
||
class RawPreprocessor(Preprocessor): | ||
"""Preprocess the notebook raw cells and convert them into plain text.""" | ||
|
||
def preprocess_cell(self, cell, resources, index): | ||
"""Preprocess a notebook cell.""" | ||
if cell.cell_type == "raw": | ||
cell.source = '```\n' + cell.source + '\n```' | ||
return cell, resources |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,51 @@ | ||
import os | ||
import shutil | ||
from .exporter import HugoExporter | ||
|
||
|
||
class HugoWriter: | ||
"""A configurable writer to create Hugo markdown from a Jupyter notebook.""" | ||
|
||
def __init__(self, config=None): | ||
self._exporter = HugoExporter(config) | ||
|
||
def convert(self, notebook, site_dir, section): | ||
"""Convert a Jupyter notebook into a Hugo markdown and write | ||
the result in the content section of the site located in site_dir. | ||
""" | ||
(markdown, resources) = self._exporter.from_filename(notebook) | ||
self._write_resources_images(resources, site_dir, section) | ||
self._write_markdown(markdown, resources, site_dir, section) | ||
|
||
def _write_resources_images(self, resources, site_dir, section): | ||
"""Process resources to create output images in static directory.""" | ||
name = resources['metadata']['name'] | ||
target_dir = os.path.join(site_dir, 'static', section, name) | ||
if 'outputs' in resources: | ||
if resources['outputs']: | ||
os.makedirs(target_dir, exist_ok=True) | ||
for key, value in resources['outputs'].items(): | ||
target = os.path.join(target_dir, key) | ||
with open(target, 'wb') as f: | ||
f.write(value) | ||
shortname = '/'.join(target.split('/')[-3:]) | ||
print(f"Created '{shortname}'") | ||
if 'images_path' in resources: | ||
if resources['images_path']: | ||
os.makedirs(target_dir, exist_ok=True) | ||
for key, value in resources['images_path'].items(): | ||
target = os.path.join(target_dir, key) | ||
shutil.copy2(value, target) | ||
shortname = '/'.join(target.split('/')[-3:]) | ||
print(f"Created '{shortname}'") | ||
|
||
def _write_markdown(self, markdown, resources, site_dir, section): | ||
"""Save markdown to file.""" | ||
name = resources['metadata']['name'] | ||
target_dir = os.path.join(site_dir, 'content', section) | ||
os.makedirs(target_dir, exist_ok=True) | ||
target = os.path.join(target_dir, f'{name}.md') | ||
with open(target, 'w') as f: | ||
f.write(markdown) | ||
shortname = '/'.join(target.split('/')[-2:]) | ||
print(f"Created '{shortname}'") |
Oops, something went wrong.