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For packages reported by xbps-checkvers as removed, generated makefile finds files matching <pkgversion>.<arch>.xbps or <pkgversion>.noarch.xbps. This is needed to know where is repodata where package is indexed (path may contain multilib, aarch64, nonfree subdirectories). Then, xbps-rindex is called to unindex package. Then, package file is removed from disk, but if it is noarch, it is recreated as empty file to allow it to be unindexed on other architectures. As it is not valid package, it won't be indexed again.
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