TransformVolume with Mac

[grandjeanlab]

Hi,
I have the issue that when I use RegisterTwoVolumes and apply the transformation matrix to the moving object in using TransformVolume, the MyImage_allign_linear and the MyImage_warpped don't overlap (when I apply linear transform).

This was the case on linux, up until I downloaded BROCCOLI's latest version (22Feb2017). when it seemed to have been fixed. However the issue remain on my Mac, despite having downloaded BROCCOLI's latest.

Code I use is as follow:
RegisterTwoVolumes MyImage standard -savematrix
TransformVolume MyImage standard -matrix MyImage_affinematrix.txt
fslview MyImage_aligned_linear MyImage_warpped

[wanderine]

I have updated the compiled RegisterTwoVolumes function for Mac, let me know if it works. 2017-03-09 2:58 GMT+01:00 joanesg <notifications@github.com>:

…

Hi, I have the issue that when I use RegisterTwoVolumes and apply the transformation matrix to the moving object in using TransformVolume, the MyImage_allign_linear and the MyImage_warpped don't overlap (when I apply linear transform). This was the case on linux, up until I downloaded BROCCOLI's latest version (22Feb2017). when it seemed to have been fixed. However the issue remain on my Mac, despite having downloaded BROCCOLI's latest. Code I use is as follow: RegisterTwoVolumes MyImage standard -savematrix TransformVolume MyImage standard -matrix MyImage_affinematrix.txt fslview MyImage_aligned_linear MyImage_warpped — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#33>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AEGryBplNdCc0OVJ8B-fQEzkCjie323Lks5rj1yygaJpZM4MXjQq> .

-- Anders Eklund, PhD

[grandjeanlab]

Works! Thank you very much.