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BIRNEY.bioperl.yml
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BIRNEY.bioperl.yml
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---
comment: |
if graph not installed then the test Assembly/ContigSpectrum.t is skipped which is a pity
match:
distribution: 'CJFIELDS/BioPerl-\d'
pl:
eexpect:
mode: anyorder
timeout: 15
reuse: 1
talk:
- 'Install \[a\]ll BioPerl scripts'
- "a\n"
- 'Do you want to run tests that require connection to servers across the internet'
- "n\n"
depends:
requires:
Graph: 0
#(circular) Bio::Tools::Run::Samtools: 0
#(hangs) Bio::Phylo: 0
#(non-cpan) Bio::DB::Sam: 0
#(circular) Bio::ASN1::EntrezGene: 0
XML::Simple: 0
#(unknown) Bio::Ext::Align: 0
XML::Writer: 0
#(unknown) Bio::SeqIO::staden::read: 0
XML::DOM::XPath: 0
#(circular) Bio::PhyloNetwork: 0
---
match:
distribution: 'CJFIELDS/BioPerl-Run-\d'
pl:
eexpect:
mode: anyorder
timeout: 15
reuse: 1
talk:
- 'Install scripts'
- "y\n"
- 'Do you want to run tests that require connection to servers across the internet'
- "n\n"