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I've run cd-hit-est with -sc 1 and -sf 1 flags, which does sort the cluster output by size but not the fasta, which is still in seemingly random order. I do also use -g 1 for best cluster assignment.
Thanks
The text was updated successfully, but these errors were encountered:
I've run cd-hit-est with -sc 1 and -sf 1 flags, which does sort the cluster output by size but not the fasta, which is still in seemingly random order. I do also use -g 1 for best cluster assignment.
Thanks
The text was updated successfully, but these errors were encountered: