A program for the exact (analytic) computation and exact triangulation of solvent-excluded surface i.e. molecular surface. Here "exact" triangulation means that each of the three vertices of any surface triangle is computed analytically.
For installation in linux (ubuntu 20.04):
(I): DOWNLOAD "sesxV002_linux.tar.gz" (Releases/tags on the right)
In USER's home directory:
(1) CREATE a directory called "softBio" (~/softBio)
(2) MOVE "sesxV002_linux.tar.gz" to ~/softBio
(2) tar -xzvf sesxV002_linux.tar.gz. It will create a directory "sesx"
(II) MODIFY .bashrc file by ADDing
LD_LIBRARY_PATH=$HOME/softBio/sesx/lib:$LD_LIBRARY_PATH
export LD_LIBRARY_PATH
(III):
(1) GO TO ~/softBio/sesx/bin
(2) RUN ./sesx or ./sesx PDBfile
For installation in Windows 10 DOWNLOAD "sesxV002_windows.zip", UNZIP it, GO TO directory sesFinal and FOLLOW the instructions in README.txt
For Usage please see "sesx_instruction.pdf"
The vidoes that associated with the intstruction are https://www.youtube.com/watch?v=GPd5xR69P-c&t=7s https://www.youtube.com/watch?v=vgVB_JylSqI&t=1s or seach "shaozi wang" in youtube
A program for the analytic computations of solvent-accessible surface area and solvent-excluded surface area.
"sesa_linux.pdf" and "sesa_windows.pdf" are, respectively, the linux and windows instructions for usage and output.
"sesaV001.tar.gz" has the linux files including the binary
"sesaV001_windows.zip" has the windows files including the binary
The same set of files could also be downloaded directly from the "sesA" repository.