GlycoSpectrumScan is a web-based bioinformatic tool designed to link glycomics and proteomics analyses for the characterization of glycopeptides. It is MS-platform independent, freely accessible, and profiles glycopeptide MS data using beforehand separately acquired released glycan and proteomics information. Both N- and O-glycosylated peptides as well as multiply glycosylated peptides can be analyzed. It has been successfully applied and tested on the human colostrum sIgA glycoprotein complex.
Updates
We are busy migrating GlycoSpectrumScan to a new Java framework. Please contact the original developers and owners of GlycoSpectrumScan if you would like to contribute to our efforts. Over the next few months we will start to add new features and improve the interfaces. Please note that a new fork exists for our new updates: https://github.com/alternativeTime/glycospectrumscan which is now bring used for all updates to this project.
Citation http://pubs.acs.org/doi/abs/10.1021/pr900956x
J Proteome Res. 2010 Feb 5;9(2):1063-75. doi: 10.1021/pr900956x. GlycoSpectrumScan: fishing glycopeptides from MS spectra of protease digests of human colostrum sIgA. Deshpande N1, Jensen PH, Packer NH, Kolarich D.
Please note that a new fork exists https://github.com/alternativeTime/glycospectrumscan which is now bring used for all updates to this project.