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Problem when first annotation has no match in DB #36

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jsaintvanne opened this issue Aug 13, 2019 · 1 comment
Open

Problem when first annotation has no match in DB #36

jsaintvanne opened this issue Aug 13, 2019 · 1 comment
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@jsaintvanne
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When the first file has no match in DB, we obtain this table

$`./0205065.CDF`
[1] pattern      alternatives
<0 rows> (or 0-length row.names)

But we would like something with annotation column like this one :

$`./0205003.CDF`
  pattern annotation alternatives
1       1         -1             
2       3         -2             
3       4         -3             
4       5         -4             
5       7         -5             

Because here we bind first annotation and then new.annotation (this one contain new column) :
https://github.com/rwehrens/metaMS/blob/master/R/matchSamples2Samples.R#L160

Just changing the first binding table can be able to add this column... but does it work good with it ?
Testing that..

@jsaintvanne
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yguitton/metaMS#14

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