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make chmod add g+rwx permissions (instead of just g+w)
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dozy committed Jun 5, 2024
1 parent 5f04309 commit 05b9eac
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion data/vtlib/star_alignment.json
Original file line number Diff line number Diff line change
Expand Up @@ -291,7 +291,7 @@
"type":"EXEC",
"use_STDIN": false,
"use_STDOUT": false,
"cmd":[ "chmod", "-R", "g+w,g-s", {"port":"src_stargenome_dir", "direction":"in"} ],
"cmd":[ "chmod", "-R", "g+rwx,g-s", {"port":"src_stargenome_dir", "direction":"in"} ],
"comment":"This is necessary because STAR creates this transitional directory as group-read-only and cannot be deleted later"
},
{
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