pre-alignment collate options #268
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…enough for realignment of coordinate-sorted input)
…d in realignment)
…elements which are themselves arrays
…ling (for realignment) add informational messages showing reads_count and calculated frac to log (stderr output)
dozy
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Mar 28, 2022
merge from devel to master to create release 2.18.0
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add selection of pre-alignment collate methods (simple collation not enough for realignment of coordinate-sorted input)