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samplyzer

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samplyzer is an R package and Web Application that enables efficient exploration of sample level QC statistics.

Requirements

  • R >= 3.3.2
  • class (>= 7.3-14),
  • ggplot2 (>= 2.2.1),
  • WriteXLS (>= 4.0.0),
  • grid (>= 3.3.2),
  • gridExtra (>= 2.2.1)

Installation

This tool is still under development, and haven't yet released to CRAN. To install from github, you will need to have devtools installed.

library(devtools)
install_github('xiaolicbs/samplyzer')

Usage

Please refer to the tutorial here.

License

This software is free and is under the MIT license.

About

An R package and Web App for efficient quality control of human whole-genome and whole-exome datasets

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