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A scientific calculator and data table for chemical elements and their isotopes for the experimental and accelerator physicist.

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barion (⛔️ DEPRECATED)

(c) Copyright M. Shahab SANJARI 2014

This C++ version of barion is no longer maintained. It is kept here for reference only. Please refer to the new python based barion.

About

barion

barion is a program for the display of scientific information and calculations related to periodic table of elements used specifically in the field of accelerator physics and related sciences. Specifically this program can be used in experiments involving mass and lifetime measurements of radioactive ion beams. In essence, this program provides a convenient interface to the published data on atomic masses in the world famous Atomic Mass Evaluation by G. Audi and colleagues. It can be used in a variety of applications such as medical radio therapy, astrophysics and fundamental physics research, etc. One can perform

  • Identification of nuclides
  • Settings of accelerator parameters specially the storage rings
  • Design and analysis of beam monitors specially Schottky detectors
  • And many more...

License

barion in its bare form as a code, is distributed under GNU GPL License (see below). The optional binary release bundle additionally contains the AME2012 database and binary versions of the ROOT library developed at CERN which are needed for the program to run. Different license agreements apply to these as described below:

The code

barion is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

barion is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with barion. If not, see http://www.gnu.org/licenses/.

The binary release bundle

The binary release is created for convenience and ease of use. Within the binary bundle, a binary version of the needed ROOT libraries are packed, so that they are linked dynamically with the program at the run time. This program does not manipulate or change any code from the ROOT library, and as such it is a program that solely uses the ROOT library. It should be brought to your attention that the complete source code of the ROOT library is available under http://root.cern.ch/drupal/ which is in turn released under the terms of LGPL as described in http://root.cern.ch/drupal/content/license. For any inquiries related to ROOT please refer to the above mentioned website.

The atomic mass evaluation AME2012 database is copyrighted material. A modified version is included in the binary bundle with kind permission of G. Audi and colleagues. This program makes NO CLAIMS OF CORRECTNESS OF THE DATA AND CALCULATION VALUES WHAT SO EVER, and all works are referred to the original publication as the only complete and correct reference:

'G. Audi et al 2012 Chinese Phys. C 36 1287' http://dx.doi.org/10.1088/1674-1137/36/12/003

Compilation from Source

Prerequisites

This program was tested to work under Linux and OSX. It should in principle also compile under CygWin, but the author didn't check this possibility. A compilation needs:

  • A C++ build environment including usual tools (Make, xxd, sed, ...)
  • ROOT Library - root-config and rootcint executables must be in PATH

A local compilation of the ROOT library would suffice. Please follow the instructions on ROOT Homepage http://root.cern.ch/drupal/content/installing-root-source in order to build root. The best would be to use the git repository in order to keep up to date with the developments. After a successful compilation, you should run the script provided by ROOT in order to set the PATH variables:

/path/to/root/bin/thisroot.sh

Now you are ready for compilation. First get the repositoty

git clone https://github.com/xaratustrah/barion

and then type make. For a complete installation for example in a system directory, you may type

PREFIX=./path/to/prefix make all db install

You also have the possibility to make a symlink in a system directory by

make symlink

Building the Database

First you need to download the database file mass12.mass from the AME & AMDC Homepage. Use the helper script ame_data_extractor.rb to extract the data like as follows:

ruby ./ame_data_extractor.rb mass.mass12 > mass12.modified

Then run the program with the -c option to create the binary database:

./barion -c mass12.modified

A file with the name of database.root will be created. You may remove the files mass12.mass and mass12.modified since they are no longer needed by the program.

Alternatively you can use the makefile to do the above procedure. Just type:

make db

and the rest is done automatically.

Usage

The program can either be started using the application release bundle under OSX. Alternatively on all systems, the program can be started using a command line. The program accepts three command line patterns:

  • Like mentioned above for creating the database ./barion -c mass12.modified
  • By explicitly choosing a database file ./barion PATH/TO/database.root
  • Or just without any options ./barion, in case the database file is in the current directory.

After the program finds the database file, it will start with a graphical window. The program interface allows for navigation around the nuclidic chart and calculation of values related with proper settings. The number entry fields can be changed by their buttons. Here one can use shift or ctrl or both to accelerate the increment step.

About

A scientific calculator and data table for chemical elements and their isotopes for the experimental and accelerator physicist.

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