- Quality inspection fastQC
- Variant calling Pipeline
- Consensus building Pipeline
- Strain typing using SNP barcoding 62 SNP markers & Script
- Spoligotyping SpoTyping or SpolPred
- RD analysis RD-Analyzer
- Variant calling using MUMmer Command
- Strain typing using SNP barcoding 62 SNP markers & Script
- Spoligotyping SpoTyping
- RD analysis RD-Analyzer for sequence RDs
- MIRU-VNTR