#Note: The annotated files by KEGG tools such as KofamKOALA are needed for gene extraction. The files should be processed like the format in the example document.
python3 KEGG_extractor.py -i example/protein -f example/Wood-Ljungdahl_20.txt -s example/species -o example/results/result_protein_WL
python3 KEGG_extractor.py -i example/cds -f example/Wood-Ljungdahl_20.txt -s example/species -o example/results/result_cds_WL