MCMCFlux

This repository serves as the source code for Bayesian kinetic modeling for tracer-based metabolomic data.

myMCMC.cpp is the main function.

genDRAM_GibbsWithMH.cpp is for the MCMC sampling.

PurineSynthesis.cpp provides all the ODE equations.

To compile the cpp functions, run "g++ -o myMCMC ./myMCMC.cpp data_process.cpp genDRAM_GibbsWithMH.cpp PurineSynthesis.cpp"

final.R is the R code for the summarization of the MCMC samples.