chore(rebuild): RFC-1: note explicit step of needing to adjust Status…

… of RFC upon draft merge To avoid fixup PRs like - ome#244 SHA: a71832a Reason: push, by @yarikoptic Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
yarikoptic · Jun 10, 2024 · 3e15c05 · 3e15c05
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commit 3e15c05
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Showing 27 changed files with 3,800 additions and 741 deletions.
diff --git a/0.1/index.html b/0.1/index.html
diff --git a/0.1/schemas/plate.schema b/0.1/schemas/plate.schema
@@ -0,0 +1,112 @@
+{
+  "$schema": "https://json-schema.org/draft/2020-12/schema",
+  "$id": "https://ngff.openmicroscopy.org/0.1/schemas/plate.schema",
+  "title": "OME-NGFF plate schema",
+  "description": "JSON from OME-NGFF Plate .zattrs",
+  "type": "object",
+  "properties": {
+    "plate": {
+      "type": "object",
+      "properties": {
+        "version": {
+          "type": "string",
+          "enum": [
+            "0.1"
+          ]
+        },
+        "name": {
+          "type": "string"
+        },
+        "columns": {
+          "description": "Columns of the Plate grid",
+          "type": "array",
+          "items": {
+            "type": "object",
+            "properties": {
+              "name": {
+                "type": "string"
+              }
+            },
+            "required": [
+              "name"
+            ]
+          },
+          "minItems": 1,
+          "uniqueItems": true
+        },
+        "rows": {
+          "description": "Rows of the Plate grid",
+          "type": "array",
+          "items": {
+            "type": "object",
+            "properties": {
+              "name": {
+                "type": "string"
+              }
+            },
+            "required": [
+              "name"
+            ]
+          },
+          "minItems": 1,
+          "uniqueItems": true
+        },
+        "wells": {
+          "description": "Rows of the Plate grid",
+          "type": "array",
+          "items": {
+            "type": "object",
+            "properties": {
+              "path": {
+                "type": "string"
+              }
+            },
+            "required": [
+              "path"
+            ]
+          },
+          "minItems": 1,
+          "uniqueItems": true
+        },
+        "field_count": {
+          "description": "Maximum number of fields per view across all wells."
+        },
+        "acquisitions": {
+          "description": "Rows of the Plate grid",
+          "type": "array",
+          "items": {
+            "type": "object",
+            "properties": {
+              "id": {
+                "type": "number"
+              },
+              "maximumfieldcount": {
+                "type": "number"
+              },
+              "name": {
+                "type": "string"
+              },
+              "description": {
+                "type": "string"
+              },
+              "starttime": {
+                "type": "number"
+              }
+            },
+            "required": [
+              "id"
+            ]
+          },
+          "minItems": 1,
+          "uniqueItems": true
+        }
+      },
+      "required": [
+        "version", "columns", "rows", "wells"
+      ]
+    }
+  },
+  "required": [
+    "plate"
+  ]
+}
diff --git a/0.1/schemas/strict_image.schema b/0.1/schemas/strict_image.schema
@@ -1,4 +1,5 @@
 {
+  "$id": "https://ngff.openmicroscopy.org/0.1/schemas/strict_image.schema",
   "allOf": [
     {
       "$ref": "https://ngff.openmicroscopy.org/0.1/schemas/image.schema"

diff --git a/0.1/schemas/well.schema b/0.1/schemas/well.schema
@@ -0,0 +1,47 @@
+{
+  "$schema": "https://json-schema.org/draft/2020-12/schema",
+  "$id": "https://ngff.openmicroscopy.org/0.1/schemas/well.schema",
+  "title": "OME-NGFF well schema",
+  "description": "JSON from OME-NGFF .zattrs",
+  "type": "object",
+  "properties": {
+    "well": {
+      "type": "object",
+      "properties": {
+        "images": {
+          "description": "The fields of view for this well",
+          "type": "array",
+          "items": {
+            "type": "object",
+            "properties": {
+              "acquisition": {
+                "description": "A unique identifier within the context of the plate",
+                "type": "integer"
+              },
+              "path": {
+                "description": "The path for this field of view subgroup",
+                "type": "string",
+                "pattern": "^[A-Za-z0-9]+$"
+              }
+            },
+            "required": [
+              "path"
+            ]
+          },
+          "minItems": 1,
+          "uniqueItems": true
+        },
+        "version": {
+          "description": "The version of the specification",
+          "type": "string",
+          "enum": [
+            "0.1"
+          ]
+        }
+      },
+      "required": [
+        "images"
+      ]
+    }
+  }
+}