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Release notes for 0.4.1
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arokem committed Sep 14, 2020
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0.4.1 (September 14, 2020)
========================

This micro release provides testing for Python 3.8 and multiple other fixes.
This release requires the newly-released DIPY 1.2.0

* BF: Register the PVE to the parameters. (#423)
* Python 3.8 (#360)
* Further subdivide nightly tests (#419)
* Many minor bug fixes (#409)
* Divide nightly test into 2; have nightly tests only do nightly tests (#417)
* Raise error earlier for empty ROI (#415)
* Update example to serve as a CI target (#380)
* Convert local_directories set to list (#414)
* Update to Dipy 1.2.0 (#384)
* Adds ParticleFilteringTractography. (#335)
* A few visualization updates (#390)
* Timing dict name mismatch bug fix (#395)
* make decision to combine profile automatic in export_all (#387)
* Export timing information (#393)
* Remove unnecessary check (#389)
* Add ability to remove edges of profiles (#386)
* Add upload_to_s3, download_and_combine_afq_profiles (#376)
* Change nighty tests to happen at midnight, PST (#383)
* Use get_fdata instead of deprecated get_data in example (#377)
* Skip seg faulting test (#378)
* Overhaul Mask File UI; Other minor UI improvements (#370)
* Return a unique set of subjects in S3BIDSStudy._all_subjects (#373)
* Allow user to seed tractography with ROIs via api. Use this to reduce test times. Mark some tests as nightly. (#364)
* Added test that runs full cli pipeline on default config file. Tell CI to not run the tests marked slow. (#356)


0.4 (August 17, 2020)
=====================
This release adds several new registration templates and techniques, providing
major improvements in bundle segmentation with waypoint ROIs. In addition, new
visualization methods using plotly were introduced, to generate HTML-based
This release adds several new registration templates and techniques, providing
major improvements in bundle segmentation with waypoint ROIs. In addition, new
visualization methods using plotly were introduced, to generate HTML-based
visualizations of bundles, and to compare longitudinal measurements. This version
relies on pybids for parsing of input datasets. Many other bug fixes and improvements.

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