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PhenoDist-environment.yml
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PhenoDist-environment.yml
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# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
_libgcc_mutex=0.1=conda_forge
_openmp_mutex=4.5=2_gnu
alsa-lib=1.2.10=hd590300_0
amply=0.1.6=pyhd8ed1ab_0
appdirs=1.4.4=pyh9f0ad1d_0
argparse-dataclass=2.0.0=pyhd8ed1ab_0
attmap=0.13.2=pyhd8ed1ab_0
attrs=23.2.0=pyh71513ae_0
bcftools=1.9=h68d8f2e_9
bedtools=2.31.1=hf5e1c6e_0
brotli-python=1.1.0=py312h30efb56_1
bwa=0.7.17=he4a0461_11
bzip2=1.0.8=hd590300_5
c-ares=1.26.0=hd590300_0
ca-certificates=2024.2.2=hbcca054_0
cairo=1.18.0=h3faef2a_0
certifi=2024.2.2=pyhd8ed1ab_0
charset-normalizer=3.3.2=pyhd8ed1ab_0
coin-or-cbc=2.10.10=h9002f0b_0
coin-or-cgl=0.60.7=h516709c_0
coin-or-clp=1.17.8=h1ee7a9c_0
coin-or-osi=0.108.8=ha2443b9_0
coin-or-utils=2.11.9=hee58242_0
coincbc=2.10.10=0_metapackage
colorama=0.4.6=pyhd8ed1ab_0
conda-inject=1.3.1=pyhd8ed1ab_0
configargparse=1.7=pyhd8ed1ab_0
connection_pool=0.0.3=pyhd3deb0d_0
curl=7.88.1=hdc1c0ab_1
datrie=0.8.2=py312h98912ed_7
docutils=0.20.1=py312h7900ff3_3
dpath=2.1.6=pyha770c72_0
eido=0.2.2=pyhd8ed1ab_0
exceptiongroup=1.2.0=pyhd8ed1ab_2
expat=2.5.0=hcb278e6_1
font-ttf-dejavu-sans-mono=2.37=hab24e00_0
font-ttf-inconsolata=3.000=h77eed37_0
font-ttf-source-code-pro=2.038=h77eed37_0
font-ttf-ubuntu=0.83=h77eed37_1
fontconfig=2.14.2=h14ed4e7_0
fonts-conda-ecosystem=1=0
fonts-conda-forge=1=0
freetype=2.12.1=h267a509_2
gatk4=4.5.0.0=py36hdfd78af_0
gettext=0.21.1=h27087fc_0
giflib=5.2.1=h0b41bf4_3
gitdb=4.0.11=pyhd8ed1ab_0
gitpython=3.1.41=pyhd8ed1ab_0
graphite2=1.3.13=h58526e2_1001
gsl=2.5=h294904e_1
harfbuzz=8.3.0=h3d44ed6_0
htslib=1.9=h244ad75_9
humanfriendly=10.0=pyhd8ed1ab_6
icu=73.2=h59595ed_0
idna=3.6=pyhd8ed1ab_0
immutables=0.20=py312h98912ed_1
importlib_resources=6.1.1=pyhd8ed1ab_0
iniconfig=2.0.0=pyhd8ed1ab_0
jinja2=3.1.3=pyhd8ed1ab_0
jsonschema=4.21.1=pyhd8ed1ab_0
jsonschema-specifications=2023.12.1=pyhd8ed1ab_0
jupyter_core=5.7.1=py312h7900ff3_0
keyutils=1.6.1=h166bdaf_0
krb5=1.20.1=h81ceb04_0
lcms2=2.16=hb7c19ff_0
ld_impl_linux-64=2.40=h41732ed_0
lerc=4.0.0=h27087fc_0
libblas=3.9.0=21_linux64_openblas
libcblas=3.9.0=21_linux64_openblas
libcups=2.3.3=h36d4200_3
libcurl=7.88.1=hdc1c0ab_1
libdeflate=1.19=hd590300_0
libedit=3.1.20191231=he28a2e2_2
libev=4.33=hd590300_2
libexpat=2.5.0=hcb278e6_1
libffi=3.4.2=h7f98852_5
libgcc-ng=13.2.0=h807b86a_5
libgfortran-ng=13.2.0=h69a702a_5
libgfortran5=13.2.0=ha4646dd_5
libglib=2.78.3=h783c2da_0
libgomp=13.2.0=h807b86a_5
libiconv=1.17=hd590300_2
libjpeg-turbo=3.0.0=hd590300_1
liblapack=3.9.0=21_linux64_openblas
liblapacke=3.9.0=21_linux64_openblas
libnghttp2=1.58.0=h47da74e_1
libnsl=2.0.1=hd590300_0
libopenblas=0.3.26=pthreads_h413a1c8_0
libpng=1.6.42=h2797004_0
libsqlite=3.45.1=h2797004_0
libssh2=1.11.0=h0841786_0
libstdcxx-ng=13.2.0=h7e041cc_5
libtiff=4.6.0=ha9c0a0a_2
libuuid=2.38.1=h0b41bf4_0
libwebp-base=1.3.2=hd590300_0
libxcb=1.15=h0b41bf4_0
libxcrypt=4.4.36=hd590300_1
libzlib=1.2.13=hd590300_5
logmuse=0.2.6=pyh8c360ce_0
markdown-it-py=3.0.0=pyhd8ed1ab_0
markupsafe=2.1.5=py312h98912ed_0
mdurl=0.1.2=pyhd8ed1ab_0
nbformat=5.9.2=pyhd8ed1ab_0
ncurses=6.4=h59595ed_2
numpy=1.26.4=py312heda63a1_0
openjdk=17.0.10=h4260e57_0
openssl=3.2.1=hd590300_0
packaging=23.2=pyhd8ed1ab_0
pandas=2.2.0=py312hfb8ada1_0
pcre2=10.42=hcad00b1_0
peppy=0.40.1=pyhd8ed1ab_0
perl=5.32.1=7_hd590300_perl5
pip=24.0=pyhd8ed1ab_0
pixman=0.43.2=h59595ed_0
pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1
plac=1.4.2=pyhd8ed1ab_0
platformdirs=4.2.0=pyhd8ed1ab_0
pluggy=1.4.0=pyhd8ed1ab_0
psutil=5.9.8=py312h98912ed_0
pthread-stubs=0.4=h36c2ea0_1001
pulp=2.8.0=py312h7900ff3_0
pygments=2.17.2=pyhd8ed1ab_0
pyparsing=3.1.1=pyhd8ed1ab_0
pysocks=1.7.1=pyha2e5f31_6
pytest=8.0.0=pyhd8ed1ab_0
python=3.12.1=hab00c5b_1_cpython
python-dateutil=2.8.2=pyhd8ed1ab_0
python-fastjsonschema=2.19.1=pyhd8ed1ab_0
python-tzdata=2024.1=pyhd8ed1ab_0
python_abi=3.12=4_cp312
pytz=2024.1=pyhd8ed1ab_0
pyyaml=6.0.1=py312h98912ed_1
readline=8.2=h8228510_1
referencing=0.33.0=pyhd8ed1ab_0
requests=2.31.0=pyhd8ed1ab_0
reretry=0.11.8=pyhd8ed1ab_0
rich=13.7.0=pyhd8ed1ab_0
rpds-py=0.17.1=py312h4b3b743_0
samtools=1.6=hc3601fc_10
scipy=1.12.0=py312heda63a1_2
setuptools=69.0.3=pyhd8ed1ab_0
six=1.16.0=pyh6c4a22f_0
slack-sdk=3.26.2=pyha770c72_0
slack_sdk=3.26.2=hd8ed1ab_0
smart_open=6.4.0=pyhd8ed1ab_0
smmap=5.0.0=pyhd8ed1ab_0
snakemake=8.4.8=hdfd78af_0
snakemake-executor-plugin-cluster-generic=1.0.7=pyhdfd78af_0
snakemake-interface-common=1.15.3=pyhdfd78af_0
snakemake-interface-executor-plugins=8.2.0=pyhdfd78af_0
snakemake-interface-storage-plugins=3.0.0=pyhdfd78af_0
snakemake-minimal=8.4.8=pyhdfd78af_0
stopit=1.1.2=py_0
tabulate=0.9.0=pyhd8ed1ab_1
throttler=1.2.2=pyhd8ed1ab_0
tk=8.6.13=noxft_h4845f30_101
tomli=2.0.1=pyhd8ed1ab_0
toposort=1.10=pyhd8ed1ab_0
traitlets=5.14.1=pyhd8ed1ab_0
typing_extensions=4.9.0=pyha770c72_0
tzdata=2024a=h0c530f3_0
ubiquerg=0.7.0=pyhd8ed1ab_0
urllib3=2.2.0=pyhd8ed1ab_0
veracitools=0.1.3=py_0
wheel=0.42.0=pyhd8ed1ab_0
wrapt=1.16.0=py312h98912ed_0
xorg-fixesproto=5.0=h7f98852_1002
xorg-inputproto=2.3.2=h7f98852_1002
xorg-kbproto=1.0.7=h7f98852_1002
xorg-libice=1.1.1=hd590300_0
xorg-libsm=1.2.4=h7391055_0
xorg-libx11=1.8.7=h8ee46fc_0
xorg-libxau=1.0.11=hd590300_0
xorg-libxdmcp=1.1.3=h7f98852_0
xorg-libxext=1.3.4=h0b41bf4_2
xorg-libxfixes=5.0.3=h7f98852_1004
xorg-libxi=1.7.10=h7f98852_0
xorg-libxrender=0.9.11=hd590300_0
xorg-libxt=1.3.0=hd590300_1
xorg-libxtst=1.2.3=h7f98852_1002
xorg-recordproto=1.14.2=h7f98852_1002
xorg-renderproto=0.11.1=h7f98852_1002
xorg-xextproto=7.3.0=h0b41bf4_1003
xorg-xproto=7.0.31=h7f98852_1007
xz=5.2.6=h166bdaf_0
yaml=0.2.5=h7f98852_2
yte=1.5.4=pyha770c72_0
zipp=3.17.0=pyhd8ed1ab_0
zlib=1.2.13=hd590300_5
zstd=1.5.5=hfc55251_0