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knitr-subfloats.lyx
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knitr-subfloats.lyx
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#LyX 2.0 created this file. For more info see http://www.lyx.org/
\lyxformat 413
\begin_document
\begin_header
\textclass article
\begin_preamble
\renewcommand{\textfraction}{0.05}
\renewcommand{\topfraction}{0.8}
\renewcommand{\bottomfraction}{0.8}
\renewcommand{\floatpagefraction}{0.75}
\end_preamble
\use_default_options true
\begin_modules
knitr
\end_modules
\maintain_unincluded_children false
\language english
\language_package default
\inputencoding auto
\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
\default_output_format default
\output_sync 0
\bibtex_command default
\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
\papersize default
\use_geometry false
\use_amsmath 1
\use_esint 1
\use_mhchem 1
\use_mathdots 1
\cite_engine basic
\use_bibtopic false
\use_indices false
\paperorientation portrait
\suppress_date false
\use_refstyle 1
\index Index
\shortcut idx
\color #008000
\end_index
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 1
\paperpagestyle default
\tracking_changes false
\output_changes false
\html_math_output 0
\html_css_as_file 0
\html_be_strict false
\end_header
\begin_body
\begin_layout Standard
\begin_inset ERT
status open
\begin_layout Plain Layout
<<setup, include=FALSE>>=
\end_layout
\begin_layout Plain Layout
opts_chunk$set(fig.path='figure/subfloats-')
\end_layout
\begin_layout Plain Layout
@
\end_layout
\end_inset
\end_layout
\begin_layout Title
Using subfloats in LyX with knitr
\end_layout
\begin_layout Author
Yihui Xie
\end_layout
\begin_layout Standard
If you insert a float figure inside a float figure in LyX, you will get
subfloats.
To make sure the two subfloats can stand side by side, you have to:
\end_layout
\begin_layout Enumerate
remove new lines between the two subfloat environments in LyX (if you are
not sure if there are blank lines between them, check the LaTeX source);
\end_layout
\begin_layout Enumerate
use the chunk option
\family typewriter
echo=FALSE
\family default
to hide the R source code in the output;
\end_layout
\begin_layout Enumerate
set
\family typewriter
out.width
\family default
to be less than half of the linewidth if you do not want the sub figures
to exceed the page margin;
\end_layout
\begin_layout Enumerate
most importantly, leave a blank line in the beginning of the subfloat environmen
t, so that
\family typewriter
<<>>=
\family default
starts in a new line and
\series bold
knitr
\series default
can recognize it;
\end_layout
\begin_layout Standard
Figure
\begin_inset CommandInset ref
LatexCommand ref
reference "fig:knitr-subfloat"
\end_inset
is an example.
\end_layout
\begin_layout Standard
This document was compiled with
\series bold
knitr
\series default
\begin_inset ERT
status open
\begin_layout Plain Layout
\backslash
Sexpr{packageVersion('knitr')}
\end_layout
\end_inset
.
Rnw source at
\begin_inset Flex URL
status collapsed
\begin_layout Plain Layout
https://github.com/yihui/knitr/blob/master/inst/examples/knitr-subfloats.Rnw
\end_layout
\end_inset
.
\end_layout
\begin_layout Standard
\begin_inset Float figure
wide false
sideways false
status open
\begin_layout Plain Layout
\begin_inset Float figure
wide false
sideways false
status open
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\end_layout
\begin_layout Plain Layout
<<test-subfloat, echo=FALSE, out.width='.45
\backslash
\backslash
linewidth'>>=
\end_layout
\begin_layout Plain Layout
plot(1)
\end_layout
\begin_layout Plain Layout
@
\end_layout
\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset Caption
\begin_layout Plain Layout
this is a subfloat
\end_layout
\end_inset
\end_layout
\end_inset
\begin_inset Float figure
wide false
sideways false
status open
\begin_layout Plain Layout
\begin_inset ERT
status open
\begin_layout Plain Layout
\end_layout
\begin_layout Plain Layout
<<test-another, echo=FALSE, out.width='.45
\backslash
\backslash
linewidth'>>=
\end_layout
\begin_layout Plain Layout
plot(rnorm(100))
\end_layout
\begin_layout Plain Layout
@
\end_layout
\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset Caption
\begin_layout Plain Layout
another float
\end_layout
\end_inset
\end_layout
\end_inset
\end_layout
\begin_layout Plain Layout
\begin_inset Caption
\begin_layout Plain Layout
one figure with 2 sub figures
\begin_inset CommandInset label
LatexCommand label
name "fig:knitr-subfloat"
\end_inset
\end_layout
\end_inset
\end_layout
\end_inset
\end_layout
\end_body
\end_document