MICE_DATA

FINISHED

[x] DFA 
[x] COSIONOR ANALYSIS 
[x] POLYNOMIAL FIT
[x] MULTI PARAMETER LINEAR FIT 
[x] RHYTHM ANALYSIS 
[x] COSINOR PRECESSION
[x] add some linux filesystem support into file.c 

Not finished

[ ] See TODO list

Usage

$ ./test [path] -- will do analysis on every temp or act file(with two days data)
$ ./main --help  -- will show you how to use this program 

./main [OPTION]... [ARGS]... 
	-f, --file
	    Name of the file to be analysised, followed by a file name
	-T, --filetype
	    The type of graph. [ MICE_DATA | MICE_DATA_38 | SINGLE_COLUM ]
	-d, --dfa
	    Exec dfa, followed by dfa order.
	-m, --mean
	    Exec mean analysis
	-s, --std
	    Exec standard analysis
	-t, --graph-type
	    The type of graph. [ GINDIVIDUAL | GAVERAGE | GDEVIATION]
	-c, --checkp
	    Check if the period equals to 24h
	-D, --duration
	    Set the duration of a single segment, 1 = 10sec (1080 = 3h)
	-L, --dlength
	    Set the whole length of individual dfa, 1 = 10sec
	-P, --startp
	    Set the start point of individual dfa, 1 = 10sec
	-S, --graph-size
	    Determint the dimensions of the graph
	-o, --output
	    Generate a pdf file for the graph, followed by a file name. If 
	not seted, show a gnuplot window

TODO

fix main

[x] fix program judge logic
[x] make some variables to be global 

fix utility functions

[x] check if gtk or pdf 
[x] check the graph type
[ ] fix the check progress
[x] make the pdf output name based on mice_name & graph_type & duration