feat: add biologic parser

* test: added biologic test back

* chore: update deps

* update: flatten meta.

* update: forgot updating one condition

* fix(flatten): just get the variables there which is the relevant data.

package.json

@@ -49,7 +49,7 @@
     "@emotion/react": "^11.10.4",
     "@lukeed/uuid": "^2.0.0",
     "@tanstack/react-table": "^8.5.15",
-    "biologic-converter": "^0.2.0",
+    "biologic-converter": "^0.3.2",
     "cheminfo-types": "^1.4.0",
     "filelist-utils": "^1.0.1",
     "immer": "^9.0.15",

src/app/data/__tests__/getIVMeasurement.test.ts

@@ -7,7 +7,7 @@ import { getEmptyDataState } from '../DataState';
 import { append } from '../append';
 import { biologicLoader } from '../loaders/biologicLoader';
 
-test.skip('getIVMeasurement', async () => {
+test('getIVMeasurement', async () => {
   const result = await getIVMeasurement();
 
   expect(result.entries).toHaveLength(2);

src/app/data/loaders/biologicLoader.ts

@@ -3,23 +3,32 @@ import { convert } from 'biologic-converter';
 import type { FileCollection } from 'filelist-utils';
 
 import { getEmptyMeasurements, Loader } from '../DataState';
+import type { MeasurementBase } from '../MeasurementBase';
 
 export const biologicLoader: Loader = async function biologicLoader(
   fileCollection: FileCollection,
 ) {
   let measurements = getEmptyMeasurements();
   const results = await convert(fileCollection);
-  for (let result of results) {
+  for (let { dir, mpr, mps, mpt } of results) {
     //still not for plotting, just a schema
-    measurements.iv.entries.push({
+    const prepare: Partial<MeasurementBase> = {
       id: v4(),
-      meta: result.mps ? { ...result.mps } : {},
       filename: '',
-      path: result.dir,
+      path: dir,
       info: {},
       title: '',
-      data: [],
-    });
+    };
+    if (mpr !== undefined) {
+      prepare.meta = { ...mpr.settings.variables };
+      prepare.data = [{ variables: mpr.data.variables }];
+    } else if (mpt !== undefined) {
+      prepare.meta = { ...mpt.settings.variables };
+      prepare.data = [{ variables: mpt.data.variables }];
+    } else if (mps !== undefined) {
+      prepare.meta = { ...mps.settings.variables };
+    }
+    measurements.iv.entries.push(prepare as MeasurementBase);
   }
   return measurements;
 };