GitHub - zeiselamit/amygdala_fc: code for analysis related to Hochgerner et al 2022

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code for analysis related to Hochgerner et al 2022

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
FC_step1_filter_neurons_v1.m		FC_step1_filter_neurons_v1.m
FC_step1_filter_nonneurons_v1.m		FC_step1_filter_nonneurons_v1.m
FC_step2_GABA_v3.m		FC_step2_GABA_v3.m
FC_step2_Glut1_v3.m		FC_step2_Glut1_v3.m
FC_step2_Glut2_v3.m		FC_step2_Glut2_v3.m
FC_step2_astro_v1.m		FC_step2_astro_v1.m
FC_step2_immune_v1.m		FC_step2_immune_v1.m
FC_step2_oligo_v1.m		FC_step2_oligo_v1.m
FC_step2_vascular_v1.m		FC_step2_vascular_v1.m
FC_step3_GABA_v3.m		FC_step3_GABA_v3.m
FC_step3_Glut1_Glut2_v3.m		FC_step3_Glut1_Glut2_v3.m
FC_step3_Glut1_v3.m		FC_step3_Glut1_v3.m
FC_step3_Glut2_v3.m		FC_step3_Glut2_v3.m
FC_step4_GABA_v3.m		FC_step4_GABA_v3.m
FC_step4_GABA_v4.m		FC_step4_GABA_v4.m
FC_step4_GABA_v5.m		FC_step4_GABA_v5.m
FC_step4_Glut1_Glut2_v4.m		FC_step4_Glut1_Glut2_v4.m
FC_step4_Glut1_Glut2_v5.m		FC_step4_Glut1_Glut2_v5.m
FC_step4_Glut1_v3.m		FC_step4_Glut1_v3.m
FC_step4_Glut1_v4.m		FC_step4_Glut1_v4.m
FC_step4_Glut2_v3.m		FC_step4_Glut2_v3.m
FC_step4_Glut2_v4.m		FC_step4_Glut2_v4.m
FC_step4_nonNeurons_v5.m		FC_step4_nonNeurons_v5.m
circleplot_markers_all_neurons_v1.m		circleplot_markers_all_neurons_v1.m
copy_rename_amy_cellranger_files_v1.m		copy_rename_amy_cellranger_files_v1.m
load_save_QC3000_v2.m		load_save_QC3000_v2.m
nonneuronal_step3_v1.m		nonneuronal_step3_v1.m
plot_all_clusters_together_v1.m		plot_all_clusters_together_v1.m
plot_all_clusters_together_v2.m		plot_all_clusters_together_v2.m
plot_different_scores_on_tsne_allneurons.m		plot_different_scores_on_tsne_allneurons.m
plot_overlap_FC_genes_v1.m		plot_overlap_FC_genes_v1.m
plot_singlegene_violin_all_clusters_v1.m		plot_singlegene_violin_all_clusters_v1.m
plot_spatial_corr_clusters_allenvoxel_v2.m		plot_spatial_corr_clusters_allenvoxel_v2.m
save_all_NONneuronal_celltypes_muhammad_v1.m		save_all_NONneuronal_celltypes_muhammad_v1.m
save_all_neuronal_celltypes_muhammad_v1.m		save_all_neuronal_celltypes_muhammad_v1.m
save_enrichedgenes_neurons_v1.m		save_enrichedgenes_neurons_v1.m
save_final_csv_neurons_v1.m		save_final_csv_neurons_v1.m
save_final_data_table_txt_v1.m		save_final_data_table_txt_v1.m