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Hi, when I wanted to use option -d to define the position range near start codon or stop codon, I met such an error:
ribotish quality: error: argument -d: expected one argument
My command line is:
ribotish quality -b D0_1.unique_mapped.sorted.bam -g Mus_musculus.GRCm39.103.chr.gtf -d -20,60
Would you please show me how to customize the position range?
Thanks a lot!
The text was updated successfully, but these errors were encountered:
The minus - sign causes python to treat it as a new option. See the following link for solution https://github.com/zhpn1024/ribotish/issues/14#issuecomment-801547509
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#14
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Hi, when I wanted to use option -d to define the position range near start codon or stop codon, I met such an error:
ribotish quality: error: argument -d: expected one argument
My command line is:
ribotish quality -b D0_1.unique_mapped.sorted.bam -g Mus_musculus.GRCm39.103.chr.gtf -d -20,60
Would you please show me how to customize the position range?
Thanks a lot!
The text was updated successfully, but these errors were encountered: