cmp - checkpoint for CMake system.

CMakeLists.txt

@@ -177,6 +177,7 @@ foreach(filepath ${ops_include_files})
     set(OPS_INCLUDE_DIRS ${OPS_INCLUDE_DIRS} ${dir_path})
 endforeach()
 list(REMOVE_DUPLICATES OPS_INCLUDE_DIRS)
+
 include_directories(${OPS_INCLUDE_DIRS})
 #message(${OPS_INCLUDE_DIRS})
 
@@ -197,12 +198,12 @@ add_library(G3_Utilities           OBJECT)
 add_library(G3_Element             OBJECT)
 add_library(G3_Material            OBJECT)
 add_library(G3_ModelBuilder        OBJECT)
-add_library(G3_Numerics            OBJECT)
-target_link_libraries(G3_Numerics
+add_library(G3_Numerics            INTERFACE)
+target_link_libraries(G3_Numerics INTERFACE
     ${ARPACK_LIBRARIES}
-    #${SUPERLU_LIBRARIES}
-    #${UMFPACK_LIBRARIES}
-    ${BLAS_LIBRARIES} ${LAPACK_LIBRARIES}
+    ${SUPERLU_LIBRARIES}
+    ${UMFPACK_LIBRARIES}
+    ${LAPACK_LIBRARIES} ${BLAS_LIBRARIES}
 )
 
 # Core OpenSees
@@ -226,7 +227,10 @@ add_library(OPS_Reliability        OBJECT EXCLUDE_FROM_ALL)
 
 add_library(G3) 
 add_library(OpenSees         EXCLUDE_FROM_ALL )
-add_executable(OpenSeesTcl   EXCLUDE_FROM_ALL ${OPS_SRC_DIR}/tcl/tclAppInit.cpp)
+add_executable(OpenSeesTcl   EXCLUDE_FROM_ALL 
+    ${OPS_SRC_DIR}/tcl/tclAppInit.cpp
+    ${OPS_SRC_DIR}/tcl/tclMain.cpp
+)
 add_executable(OpenSeesSP    EXCLUDE_FROM_ALL ${OPS_SRC_DIR}/tcl/tclAppInit.cpp)
 add_executable(OpenSeesMP    EXCLUDE_FROM_ALL ${OPS_SRC_DIR}/tcl/tclAppInit.cpp)
 add_executable(OpenSeesPy    EXCLUDE_FROM_ALL ${OPS_SRC_DIR}/interpreter/pythonMain.cpp)
@@ -332,7 +336,9 @@ opensees_add_cxx_flag(TARGETS OPS_Tcl
 #----------------------------
 # OpenSeesTcl
 #----------------------------
-target_link_libraries(OpenSeesTcl
+#target_include_directories(OpenSeesTcl PUBLIC ${OPS_INCLUDE_DIRS})
+
+target_link_libraries(OpenSeesTcl 	
 	OPS_Tcl ${OPS_Element_List} OPS_Thermal OpenSees ${CMAKE_DL_LIBS}
         #${SUPERLU_LIBRARIES}
 )
@@ -405,7 +411,7 @@ endif()
 #----------------------------
 if (OPS_Use_PFEM)
     message("OPS >>> Including OPS_PFEM option")
-    target_link_libraries(${OPS_FINAL_TARGET}  OPS_PFEM)
+    #target_link_libraries(${OPS_FINAL_TARGET}  OPS_PFEM)
 endif()
 
 #----------------------------

Conf.cmake

@@ -39,7 +39,7 @@ option(OPS_Use_Graphics
     "Include graphics"                                       OFF)
 
 option(OPS_Use_PFEM 
-    "Include PFEM library"                                    ON)
+    "Include PFEM library"                                   OFF)
 
 option(OPS_Use_ASDEA
     "Include ASDEA library"                                   ON)
@@ -89,18 +89,18 @@ opensees_load(TCL
     INCLUDE /home/claudio/miniconda3/include 
 )
 
-opensees_load(BLAS                                         SEARCH)
-	#LIBRARY /home/claudio/lib/libBlas.a
-	#)
+opensees_load(BLAS                                         #SEARCH)
+    LIBRARY /home/claudio/lib/libBlas.a
+)
 
-opensees_load(LAPACK                                       SEARCH)
-#LIBRARY /home/claudio/lib/libLapack.a
-#)
+opensees_load(LAPACK                                       #SEARCH)
+    LIBRARY /home/claudio/lib/libLapack.a
+)
 
-#opensees_load(SUPERLU                                      SEARCH)
-	#LIBRARY /home/claudio/lib/libSuperLU.a
-    	#INCLUDE ${OPS_BUNDLED_DIR}/SuperLU_5.1.1/
-	#)
+opensees_load(SUPERLU                                      #SEARCH)
+    LIBRARY /home/claudio/lib/libSuperLU.a
+    INCLUDE ${OPS_BUNDLED_DIR}/SuperLU_5.1.1/
+)
 
 opensees_load(ARPACK                                       SEARCH)
 

OTHER/LAPACK/CMakeLists.txt

@@ -0,0 +1,48 @@
+project(LAPACK)
+target_sources(LAPACK
+        dgeqr2.o dlabad.o dlacon.o dlacpy.o dladiv.o dlae2.o dlaev2.o
+        dlaexc.o dlagtm.o dlahqr.o dlaln2.o dlamch.o dlange.o dlanhs.o
+        dlanst.o dlanv2.o dlaptm.o dlapy2.o dlapy3.o dlaran.o dlarf.o
+        dlarfg.o dlarfx.o dlarnd.o dlarnv.o dlartg.o dlaruv.o dlascl.o
+        dlaset.o dlasr.o  dlasrt.o dlassq.o dlasy2.o dorm2r.o dsteqr.o
+        dtrevc.o dtrexc.o dtrsen.o dtrsyl.o dgbtf2.o dgbtrf.o dgbtrs.o
+	dgttrf.o dgttrs.o dpttrf.o dpttrs.o dlaswp.o dgbsv.o dpbtrs.o
+	dgesv.o dgetrs.o dpbsv.o dgetrf.o dgetf2.o dpbtrf.o dpotf2.o
+	dpbtf2.o dgels.o dgeqrf.o dgelqf.o dormqr.o dormlq.o
+	dgelq2.o dlarft.o dlarfb.o dorml2.o
+	dlaebz.o dlagtf.o dlagts.o dlansb.o dlar2v.o dlargv.o
+	dlartv.o dsbevx.o dsbtrd.o dstebz.o dstein.o dsterf.o
+	dgetri.o dtrtri.o dtrti2.o dgebak.o dgebal.o dgeev.o
+	dgehd2.o dgehrd.o dhseqr.o dlahrd.o 
+	dorg2r.o dorghr.o dorgqr.o dpotrf.o dpotrs.o dtrtrs.o 
+	dggbak.o dggbal.o dggev.o dgghrd.o dhgeqz.o dlag2.o dlasv2.o dtgevc.o 
+	dgesvxx.o dla_gerfsx_extended.o dlascl2.o dlaqge.o dgeequb.o dgerfsx.o 
+	chla_transtype.o dla_gercond.o dla_wwaddw.o ilaprec.o ilatrans.o dgecon.o 
+	dla_geamv.o dlacn2.o dla_lin_berr.o drscl.o dlatrs.o dla_rpvgrw.o dla_gerpvgrw.o 
+	BLAS_dgemv2_x.o BLAS_dgemv2_x-f2c.o 
+	BLAS_dgemv_x.o BLAS_dgemv_x-f2c.o BLAS_error.o BLAS_error.o
+)
+
+
+
+IOBJ  = ilaenv.o lsame.o lsamen.o xerbla.o xlaenv.o ieeeck.o
+
+all: double 
+
+double: $(DOBJ) $(IOBJ)
+	@$(RM) $(RMFLAGS) $(LAPACK_LIBRARY)
+	@$(AR) $(ARFLAGS) $(LAPACK_LIBRARY) $(DOBJ) $(IOBJ)
+	@$(RANLIB) $(LAPACK_LIBRARY)
+
+# Miscellaneous
+tidy:	
+	@$(RM) $(RMFLAGS) Makefile.bak *~ #*# core go
+
+clean: tidy
+	@$(RM) $(RMFLAGS) $(OBJS) *.o test go
+
+spotless: clean
+
+wipe: spotless
+
+# DO NOT DELETE THIS LINE -- make depend depends on it.

OTHER/UMFPACK/CMakeLists.txt

@@ -0,0 +1,150 @@
+include ../../Makefile.def
+
+I = -I. -I../AMD
+C = $(CC) $(OPT_FLAG) -fexceptions -fPIC -DNCHOLMOD $(I)
+
+#-------------------------------------------------------------------------------
+# source files
+#-------------------------------------------------------------------------------
+
+# non-user-callable umf_*.[ch] files:
+UMFCH = umf_assemble umf_blas3_update umf_build_tuples umf_create_element \
+	umf_extend_front umf_garbage_collection umf_get_memory \
+	umf_init_front umf_kernel umf_kernel_init umf_kernel_wrapup \
+	umf_local_search umf_lsolve umf_ltsolve umf_mem_alloc_element \
+	umf_mem_alloc_head_block umf_mem_alloc_tail_block \
+	umf_mem_free_tail_block umf_mem_init_memoryspace \
+	umf_report_vector umf_row_search umf_scale_column \
+	umf_set_stats umf_solve umf_symbolic_usage umf_transpose \
+	umf_tuple_lengths umf_usolve umf_utsolve umf_valid_numeric \
+	umf_valid_symbolic umf_grow_front umf_start_front \
+	umf_store_lu umf_scale
+
+# non-user-callable umf_*.[ch] files, int/SuiteSparse_long versions only
+# (no real/complex):
+UMFINT = umf_analyze umf_apply_order umf_colamd umf_free umf_fsize \
+	umf_is_permutation umf_malloc umf_realloc umf_report_perm \
+	umf_singletons umf_cholmod
+
+# non-user-callable, created from umf_ltsolve.c, umf_utsolve.c,
+# umf_triplet.c, and umf_assemble.c , with int/SuiteSparse_long
+# and real/complex versions:
+UMF_CREATED = umf_lhsolve umf_uhsolve umf_triplet_map_nox \
+	umf_triplet_nomap_x umf_triplet_nomap_nox umf_triplet_map_x \
+	umf_assemble_fixq umf_store_lu_drop
+
+# non-user-callable, int/SuiteSparse_long and real/complex versions:
+UMF = $(UMF_CREATED) $(UMFCH)
+
+# user-callable umfpack_*.[ch] files (int/SuiteSparse_long and real/complex):
+UMFPACK = umfpack_col_to_triplet umfpack_defaults umfpack_free_numeric \
+	umfpack_free_symbolic umfpack_get_numeric umfpack_get_lunz \
+	umfpack_get_symbolic umfpack_get_determinant umfpack_numeric \
+	umfpack_qsymbolic umfpack_report_control umfpack_report_info \
+	umfpack_report_matrix umfpack_report_numeric umfpack_report_perm \
+	umfpack_report_status umfpack_report_symbolic umfpack_report_triplet \
+	umfpack_report_vector umfpack_solve umfpack_symbolic \
+	umfpack_transpose umfpack_triplet_to_col umfpack_scale \
+	umfpack_load_numeric umfpack_save_numeric \
+	umfpack_load_symbolic umfpack_save_symbolic
+
+# user-callable, created from umfpack_solve.c (umfpack_wsolve.h exists, though):
+# with int/SuiteSparse_long and real/complex versions:
+UMFPACKW = umfpack_wsolve
+
+USER = $(UMFPACKW) $(UMFPACK)
+
+# user-callable, only one version for int/SuiteSparse_long,
+# real/complex, *.[ch] files:
+GENERIC = umfpack_timer umfpack_tictoc
+
+#-------------------------------------------------------------------------------
+# include files:
+#-------------------------------------------------------------------------------
+
+INC = umfpack.h ../AMD/SuiteSparse_config.h \
+	umf_config.h umf_version.h \
+	umf_internal.h umf_triplet.h \
+	$(addprefix ./,  $(addsuffix .h,$(UMFCH))) \
+	$(addprefix ./,  $(addsuffix .h,$(UMFINT))) \
+	$(addprefix ./, $(addsuffix .h,$(USER))) \
+	$(addprefix ./, $(addsuffix .h,$(GENERIC))) \
+	../AMD/amd_internal.h ../AMD/amd.h
+
+#-------------------------------------------------------------------------------
+# object files for each version
+#-------------------------------------------------------------------------------
+UMFPACK_DI = $(addsuffix .o, $(subst umf_,umf_di_,$(UMF)) $(subst umfpack_,umfpack_di_,$(USER)))
+UMFPACK_II = $(addsuffix .o, $(subst umf_,umf_i_,$(UMFINT)))
+UMFPACK_GN = $(addsuffix .o, $(subst umfpack_,umfpack_gn_,$(GENERIC)))
+
+
+# obj
+UMFPACK_OBJ = $(UMFPACK_DI) $(UMFPACK_II) $(UMFPACK_GN)
+
+
+
+all: umfpack
+
+#-------------------------------------------------------------------------------
+# compile each int and SuiteSparse_long routine (with no real/complex version)
+#-------------------------------------------------------------------------------
+
+umf_i_%.o: umf_%.c $(INC)
+	$(C) -DDINT -c $< -o $@
+
+#-------------------------------------------------------------------------------
+# compile each routine in the DI version
+#-------------------------------------------------------------------------------
+
+umf_di_%.o: umf_%.c $(INC)
+	$(C) -DDINT -c $< -o $@
+
+umf_di_%hsolve.o: umf_%tsolve.c $(INC)
+	$(C) -DDINT -DCONJUGATE_SOLVE -c $< -o $@
+
+umf_di_triplet_map_x.o: umf_triplet.c $(INC)
+	$(C) -DDINT -DDO_MAP -DDO_VALUES -c $< -o $@
+
+umf_di_triplet_map_nox.o: umf_triplet.c $(INC)
+	$(C) -DDINT -DDO_MAP -c $< -o $@
+
+umf_di_triplet_nomap_x.o: umf_triplet.c $(INC)
+	$(C) -DDINT -DDO_VALUES -c $< -o $@
+
+umf_di_triplet_nomap_nox.o: umf_triplet.c $(INC)
+	$(C) -DDINT -c $< -o $@
+
+umf_di_assemble_fixq.o: umf_assemble.c $(INC)
+	$(C) -DDINT -DFIXQ -c $< -o $@
+
+umf_di_store_lu_drop.o: umf_store_lu.c $(INC)
+	$(C) -DDINT -DDROP -c $< -o $@
+
+umfpack_di_wsolve.o: umfpack_solve.c $(INC)
+	$(C) -DDINT -DWSOLVE -c $< -o $@
+
+umfpack_di_%.o: umfpack_%.c $(INC)
+	$(C) -DDINT -c $< -o $@
+
+#-------------------------------------------------------------------------------
+# Create the generic routines (GN) using a generic rule
+#-------------------------------------------------------------------------------
+
+umfpack_gn_%.o: umfpack_%.c $(INC)
+	$(C) -c $< -o $@
+
+#-------------------------------------------------------------------------------
+# Create the libumfpack.a library
+#-------------------------------------------------------------------------------
+
+umfpack: $(UMFPACK_OBJ)
+	@$(RM) $(RMFLAGS) $(UMFPACK_LIBRARY)
+	@$(AR) $(ARFLAGS) $(UMFPACK_LIBRARY) $(UMFPACK_OBJ)
+	@$(RANLIB) $(UMFPACK_LIBRARY)
+
+clean:
+	@$(RM) $(RMFLAGS) *.o
+
+wipe: clean
+

SRC/domain/constraints/CMakeLists.txt

@@ -6,21 +6,21 @@ target_sources(G3_Domain
 	RigidDiaphragm.cpp
 	RigidRod.cpp 
 	SP_Constraint.cpp 
+	Pressure_Constraint.cpp
     PUBLIC
 	MP_Constraint.h 
 	RigidBeam.h 
 	RigidDiaphragm.h
 	RigidRod.h 
 	SP_Constraint.h 
+	Pressure_Constraint.h
 )
 target_sources(OPS_Domain
     PRIVATE
 	ImposedMotionSP.cpp 
 	ImposedMotionSP1.cpp
-	Pressure_Constraint.cpp
     PUBLIC
 	ImposedMotionSP.h 
 	ImposedMotionSP1.h
-	Pressure_Constraint.h
 )
 target_include_directories(OPS_Domain PUBLIC $(CMAKE_CURRENT_LIST_DIR))

SRC/element/PFEMElement/CMakeLists.txt

@@ -25,8 +25,8 @@ target_sources(OPS_Element_PFEMElement
         PFEMElement2DQuasi.cpp
         PFEMElement3DBubble.cpp
         PFEMElement3D.cpp
-        PFEMElement3Dmini.cpp
-        PFEMMesher2D.cpp
+	#PFEMElement3Dmini.cpp
+	#PFEMMesher2D.cpp
         PFEMMesher3D.cpp
         QuadMesh.cpp
         QuadMeshGenerator.cpp
@@ -62,8 +62,8 @@ target_sources(OPS_Element_PFEMElement
         PFEMElement2DQuasi.h
         PFEMElement3DBubble.h
         PFEMElement3D.h
-        PFEMElement3Dmini.h
-        PFEMMesher2D.h
+	#PFEMElement3Dmini.h
+	#PFEMMesher2D.h
         PFEMMesher3D.h
         QuadMeshGenerator.h
         QuadMesh.h

SRC/system_of_eqn/linearSOE/CMakeLists.txt

@@ -18,7 +18,7 @@ add_subdirectory(diagonal)
 add_subdirectory(fullGEN)
 add_subdirectory(sparseGEN)
 add_subdirectory(sparseSYM)
-add_subdirectory(umfGEN)
+#add_subdirectory(umfGEN)
 
 add_subdirectory(profileSPD)
 #add_subdirectory(cg)

SRC/system_of_eqn/linearSOE/sparseGEN/CMakeLists.txt

@@ -16,31 +16,33 @@ target_sources(G3_SysOfEqn
 
 target_sources(OPS_PFEM
     PRIVATE
-        PFEMSolver.cpp
-        PFEMLinSOE.cpp
-        PFEMCompressibleSolver.cpp
         PFEMCompressibleLinSOE.cpp
-        PFEMSolver_LumpM.cpp
-        PFEMSolver_Umfpack.cpp
-        PFEMQuasiLinSOE.cpp
-        PFEMQuasiSolver.cpp
+        PFEMCompressibleSolver.cpp
         PFEMDiaLinSOE.cpp
         PFEMDiaSolver.cpp
+        PFEMLinSOE.cpp
+        PFEMQuasiLinSOE.cpp
+        PFEMQuasiSolver.cpp
+
+        PFEMSolver.cpp
         PFEMSolver_Laplace.cpp
         PFEMSolver_LumpM.cpp
+        PFEMSolver_LumpM.cpp
+        PFEMSolver_Umfpack.cpp
     PUBLIC
-        PFEMSolver.h
-        PFEMLinSOE.h
-        PFEMCompressibleSolver.h
         PFEMCompressibleLinSOE.h
-        PFEMSolver_LumpM.h
-        PFEMSolver_Umfpack.h
-        PFEMQuasiLinSOE.h
-        PFEMQuasiSolver.h
+        PFEMCompressibleSolver.h
         PFEMDiaLinSOE.h
         PFEMDiaSolver.h
+        PFEMLinSOE.h
+        PFEMQuasiLinSOE.h
+        PFEMQuasiSolver.h
+
+        PFEMSolver.h
         PFEMSolver_Laplace.h
         PFEMSolver_LumpM.h
+        PFEMSolver_LumpM.h
+        PFEMSolver_Umfpack.h
 )
 
 target_sources(OpenSeesMP