add scripts to generate the mask files

seisflow/scripts/xsede/xsede_make_gaussian_mask.py

@@ -0,0 +1,24 @@
+import click
+
+from ...slurm.submit_job import submit_job
+from ..structure_inversion.make_gaussian_mask import make_gaussian_mask
+
+
+@click.command()
+@click.option('--base_dir', required=True, type=str, help="the simulation directory")
+@click.option('--sem_bin_dir', required=True, type=str, help="the sem program directory")
+@click.option('--output_dir', required=True, type=str, help="the output directory")
+@click.option('--nproc', required=True, type=int, help="nproc in the database directory")
+@click.option('--n_node', required=True, type=int, help="number of nodes to use")
+@click.option('--n_cores', required=True, type=int, help="number of cores to use")
+@click.option('--partition', required=True, type=str, help="the partition to use, eg: skx-normal")
+@click.option('--used_time', required=True, type=str, help="the running time")
+@click.option('--account', required=True, type=str, help="the account to use")
+def main(base_dir, sem_bin_dir, output_dir, nproc, n_node, n_cores, partition, used_time, account):
+    thecommand = make_gaussian_mask(base_dir, sem_bin_dir, output_dir, nproc)
+    submit_job("generate mask", thecommand,
+               n_node, n_cores, partition, used_time, account, "stampede2")
+
+
+if __name__ == "__main__":
+    main()  # pylint: disable=no-value-for-parameter