CLAM_ENCODE_Snakemake

Snakemake pipeline for running CLAM on ENCODE eCLIP data

Name		Name	Last commit message	Last commit date
Latest commit History 31 Commits
doc		doc
scripts		scripts
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
Snakefile		Snakefile
all_data.txt		all_data.txt
batch_run.py		batch_run.py
clusterconfig.yaml		clusterconfig.yaml
config.template.yaml		config.template.yaml
configure_ENCODE_eCLIP.py		configure_ENCODE_eCLIP.py
make_ln_for_PennNgsc.py		make_ln_for_PennNgsc.py
make_snakemake_ln.sh		make_snakemake_ln.sh
prepare_individual_run.sh		prepare_individual_run.sh
run_snakemake.sh		run_snakemake.sh
submit.sh		submit.sh

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