Genome_analysis_scripts

Scripts used for various genomic analyses, including assembly and annotation

Name		Name	Last commit message	Last commit date
Latest commit History 564 Commits
annotation_table		annotation_table
currently_unused		currently_unused
gene_annotation_pipeline		gene_annotation_pipeline
ggf		ggf
pipeline_scripts		pipeline_scripts
LICENSE.md		LICENSE.md
README.md		README.md
augustus_to_EVMgff3.py		augustus_to_EVMgff3.py
fasta_extractSubset.py		fasta_extractSubset.py
gene_model_basic_naming.py		gene_model_basic_naming.py
gene_model_curate.py		gene_model_curate.py
genome_stats.py		genome_stats.py
gff3_add_protein_lines.py		gff3_add_protein_lines.py
gff3_entry_retrieve_remove.py		gff3_entry_retrieve_remove.py
gff3_handling.py		gff3_handling.py
gff3_merge.py		gff3_merge.py
gff3_merge_old.py		gff3_merge_old.py
gff3_order.py		gff3_order.py
gff3_range_retrieve.py		gff3_range_retrieve.py
gff3_reformat.py		gff3_reformat.py
gff3_rnammer_update.py		gff3_rnammer_update.py
gff3_to_fasta.py		gff3_to_fasta.py
gff3_to_fasta_v2.py		gff3_to_fasta_v2.py
gff3_trnascan-se_update.py		gff3_trnascan-se_update.py
gffcompare_novel_analyser.py		gffcompare_novel_analyser.py
lowercase_count.py		lowercase_count.py
mikadocompare_novel_analyser.py		mikadocompare_novel_analyser.py
mtdna_gff2_order.py		mtdna_gff2_order.py
n_count.py		n_count.py
repeatmasker_outfile_extraclass.py		repeatmasker_outfile_extraclass.py

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