zkstewart / Various_scripts Public

Repository for scripts with non-specific purpose

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Name		Name	Last commit message	Last commit date
Latest commit History 1,105 Commits
BINge		BINge
CD-HIT		CD-HIT
DGE		DGE
EvidentialGene		EvidentialGene
Excel_VBA		Excel_VBA
Fasta_related		Fasta_related
Function_packages		Function_packages
GFF3		GFF3
GMAP		GMAP
KEGG		KEGG
Micro_stats		Micro_stats
Orthofinder		Orthofinder
PDF_related		PDF_related
QC		QC
SBAM		SBAM
Toxins_annot		Toxins_annot
TransDecoder		TransDecoder
Whole_genome_alignment		Whole_genome_alignment
agalma		agalma
alphafold		alphafold
basespace		basespace
blasting		blasting
clustering		clustering
contaminant_removal		contaminant_removal
exome_project		exome_project
gene_family/CAFE		gene_family/CAFE
gene_ontology		gene_ontology
ncbi		ncbi
popgen		popgen
taxonomy		taxonomy
uploading		uploading
.gitignore		.gitignore
NCBI_contam_fix.py		NCBI_contam_fix.py
README.md		README.md
arrow_fix.py		arrow_fix.py
blast_handling_master_code.py		blast_handling_master_code.py
convenience_functions_master_code.py		convenience_functions_master_code.py
delim_text_association.py		delim_text_association.py
densityPlotter.py		densityPlotter.py
domtblout2go.py		domtblout2go.py
fasta_handling_master_code.py		fasta_handling_master_code.py
mmseqs2_cluster_extract.py		mmseqs2_cluster_extract.py
mmseqs2_postprocess.py		mmseqs2_postprocess.py
parse_domtblout.py		parse_domtblout.py
run_clustering.py		run_clustering.py
run_mmseqs2.py		run_mmseqs2.py
run_signalp.py		run_signalp.py
safe_file_concat.py		safe_file_concat.py
sigp_terminal.py		sigp_terminal.py
stacks_vcf_allele_re-pair.py		stacks_vcf_allele_re-pair.py
table_merger.py		table_merger.py