Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

compute_pseudobulk_gex #202

Merged
merged 8 commits into from Oct 20, 2022
Merged

compute_pseudobulk_gex #202

merged 8 commits into from Oct 20, 2022

Conversation

zktuong
Copy link
Owner

@zktuong zktuong commented Oct 19, 2022

replace nhood_gex with compute_pseudobulk_gex.

update project_pseudotime_to_cell to enable compute_pseudobulk_gex to work.

@codecov
Copy link

codecov bot commented Oct 19, 2022

Codecov Report

Merging #202 (35b9c13) into master (09d1271) will decrease coverage by 0.02%.
The diff coverage is 16.66%.

@@            Coverage Diff             @@
##           master     #202      +/-   ##
==========================================
- Coverage   81.35%   81.32%   -0.03%     
==========================================
  Files          48       48              
  Lines        8810     8813       +3     
==========================================
  Hits         7167     7167              
- Misses       1643     1646       +3     
Flag Coverage Δ
unittests 81.32% <16.66%> (-0.03%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
dandelion/tools/__init__.py 100.00% <ø> (ø)
dandelion/tools/_trajectory.py 14.15% <16.66%> (-0.39%) ⬇️

@zktuong zktuong merged commit b3fe541 into master Oct 20, 2022
@zktuong zktuong deleted the nhood_gex branch October 20, 2022 06:59
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant