PAGER-scFGA: an online interactive single-cell functional genomics analysis platform

A case study of natural killer cell functional maturation and differentiation

Online tool available at: [(https://au-singlecell.streamlit.app/)]

Zongliang Yue*, Fengyuan Huang, Robert Welner, and Jake Chen

contact: zzy0065@auburn.edu

How to cite us

PAGER-scFGA: Unveiling Cell Functions and Molecular Mechanisms in Cell Trajectories through Single-Cell Functional Genomics Analysis (under review)

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Developement Details

python v3.11

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Steps to run on your local server.

1. Download the source code.
2. Install python.
3. Install packages in the file "requirements.txt".
4. Run the command line "streamlit run scanpy_script.py".

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If you need any technical support, please email Zongliang Yue, zzy0065@auburn.edu.

Our lab: AI.pharm research group at AI@AU, Auburn University, Alabama, USA. Link: [(https://zongyue1010.github.io/)]