Wiki Management
Victor Lin edited this page Jun 1, 2020
·
1 revision
Wiki pages can be manually added using the New Page button. Please add a link to it in the Sidebar as well.
If you want to add a new file (e.g. image under img/), follow these steps:
- Clone the wiki repository:
git clone https://github.com/ababaian/serratus.wiki.git. This will create a new folderserratus.wikiwhere the command is executed. - Add files in the local copy.
-
git committhe changes. -
git pushthe committed changes.
To add an image from img/ in a wiki page, add this markdown: 
- Accessing Serratus Data
- Data Types
- Sequence References
- Running Serratus
- Finding Novel Viruses (tutorials)
- Papers using Serratus
- Containers
- Summarizer usage
- Cloud Budgeting
- Data Policy
- Serratus Annotation
- Serratus Assembly
- FLOM reference
- Proteome guided assembly for high divergence low coverage genomes
- PRICE de novo assembly
- Taxonomy case study of misannotated Genbank entry
- Taxonomy prediction
- Tree placement and taxonomy data
- Design of nucleotide summarizer scoring and-depth estimates
- Cov-phylogenetic-tree-quality-by-monophylicity
- Running a Treesearch
- Finding-transfer---recombination-events-in-the-Spike-protein
- Serratus SQL Database Management
- Trees-and-alignments-for-Ribovirus-orders-and-families
- Viral-contigs-containing-RdRP