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Squashing bugs
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Squashing bugs
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Achievement: StarstruckAchievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor
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Achievements

Achievement: StarstruckAchievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor
BetaSend feedback

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@ComputationalPhysiology @scientificcomputing
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finsberg/README.md

My PyPI packages

I'm Henrik Finsberg, a Senior Research Engineer working at Simula Research Laboratory in department of Computational Physiology in Oslo, Norway🇳🇴.

I care about reproducibility and good software design. I work primarily with Python but also do some work with JavaScript, C and C++. Recently, I am also trying to pick up Rust.

I work actively on creating tools and guidelines for reproducible research software in the section for scientific computing

A few open source projects I work on

  • ap_features - Library for computing features for action potential traces
  • mps - Tool for working with cardiac MPS data
  • mps-motion - Motion tracking software for cardiac MPS data
  • gotran - Library for declaring and translating ODEs
  • goss - General ODE system solver

I am also an active user of FEniCS and are working on adopting several of my packages to FEniCSx including

  • simcardems - Simula Cardiac ElectroMechanics Solver (FEniCSx version is coming in the future)
  • fenics-pulse and fenicsx-pulse - Simulation software for cardiac mechanics
  • fenics-plotly and fenicsx-plotly Library for plotting object with plotly
  • ldrb - Library for creating rule-based fiber orientations (FEniCSx version is coming in the future)

Pinned

  1. pulse pulse Public

    A software for solving problems in cardiac mechanics

    Python 15 9

  2. ldrb ldrb Public

    A software for assigning myocardial fiber orientations based on the Laplace Dirichlet Ruled-Based algorithm

    Python 20 8

  3. fenics-plotly fenics-plotly Public

    Lightweight library for plotting FEniCS objects using Plotly

    Python 6

  4. category-theory-python category-theory-python Public

    Learning platform for category theory in python

    Python 15

  5. ComputationalPhysiology/ap_features ComputationalPhysiology/ap_features Public

    Package to compute features of traces from action potential models

    Python 6 3

  6. ComputationalPhysiology/simcardems ComputationalPhysiology/simcardems Public

    Simula Cardiac ElectroMechanics Solver

    Python 9 7