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222 Open 773 Closed
222 Open 773 Closed
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Issues list

Compression differences on Windows
#2013 opened Apr 25, 2024 by mataton
dtype issues on Windows
#2012 opened Apr 23, 2024 by mataton
1
Expose _vectorize_counts_and_tree proposal quick fix
#2010 opened Apr 18, 2024 by mortonjt
TreeNode.from_taxonomy should take a pandas dataframe as input enhancement proposal quick fix
#2009 opened Apr 18, 2024 by mortonjt
1
Review existing dependencies
#2007 opened Apr 10, 2024 by valentynbez
3
Protein LLM data structures
#2006 opened Apr 10, 2024 by mortonjt
6 tasks
18
Testing skbio against QIIME 2 to ensure integrity and/or identify breaking points CI / testing
#1993 opened Mar 24, 2024 by qiyunzhu
Pathlib support for the IO registry
#1983 opened Mar 20, 2024 by wasade
Add more zero replacement methods proposal
#1981 opened Mar 19, 2024 by qiyunzhu
1
Efficient sequence alignment path data structure enhancement
#1974 opened Mar 17, 2024 by qiyunzhu
@mataton
1
OrdinationResults formatting assumes pd.Series on certain attributes
#1972 opened Mar 17, 2024 by wasade
List of skbio changes that might affect QIIME 2 API
#1970 opened Mar 14, 2024 by qiyunzhu
Update makefile
#1968 opened Mar 11, 2024 by mataton
scikit-bio ASCII art should be updated proposal
#1967 opened Mar 11, 2024 by qiyunzhu
NumPy 2.0 compatibility dependencies met
#1964 opened Mar 9, 2024 by qiyunzhu
8
Streamlining requirements
#1962 opened Mar 5, 2024 by mataton
Rename DistanceMatrix and OrdinationResults IDs
#1959 opened Feb 29, 2024 by wasade
EventMetadata as a new metadata format proposal
#1946 opened Feb 21, 2024 by mortonjt
Edge case: IO registry is not closing context correctly at program exit
#1941 opened Feb 14, 2024 by wasade
Translation of degenerate sequences enhancement
#1911 opened Dec 21, 2023 by qiyunzhu
Refactoring skbio's plotting feature refactor
#1895 opened Nov 15, 2023 by qiyunzhu
Potential improvement for subsample_counts performance
#1885 opened Nov 4, 2023 by qiyunzhu
@wasade
Unable to install scikit-bio in mac OS
#1881 opened Oct 11, 2023 by Rishikeshklaxmi
1
Need to calculate chao beta diversity
#1880 opened Oct 5, 2023 by levisimons
2
Spurious Alignments with StripedSmithWaterman?
#1876 opened Sep 5, 2023 by scideas
ProTip! What’s not been updated in a month: updated:<2024-03-27.