v2.0.0

Supported mirror plot to show the spectral similarity between observed spectrum and predicted spectrum using deep learning models. The prediction is done through the koina server in real time. Supported deep learning models include Prosit models and AlphaPeptDeep models:

AlphaPept_ms2_generic
Prosit_2019_intensity
Prosit_2023_intensity_timsTOF
Prosit_2020_intensity_CID
Prosit_2023_intensity_XL_CMS2
Prosit_2020_intensity_TMT
Prosit_2020_intensity_HCD
Prosit_2023_intensity_XL_CMS3

v1.8.2

Fixed a bug (#63) when importing FragPipe result (psm.tsv and mzML files).

v1.8.1

1. Fixed the color setting issue for i* and r* ions;
2. Improved meta data visualization for MS/MS data in mzML format.

v1.8.0

1. Supported Casanovo;
2. Improved visualization for PDV txt format input.

v1.7.4

1. Fixed a few bugs for visualizing FragPipe/MSFragger results.

v1.7.3

Mascot dat file: Fixed a bug of processing N term modification.

v1.7.2

Fixed a bug of loading Mascot .dat file.

v1.7.1

Fixed a bug in column selection.

v1.7.0

1. Supported visualizing N-linked intact glycopeptide identification result (identification file: psm.tsv, MS/MS file: mzML format) generated by MSFragger-Glyco/Philosopher;
2. Supported showing multiple types of ions (for example, c/z and b/y) in sequence;
3. For Philosopher/MSFragger result, in default only selected columns are shown in the table.

v1.6.1

1. Fixed a bug in column selection when viewing MSFragger result;
2. Fixed a bug of modification display in mirror spectra visualization;
3. Optimized loading MaxQuant result and added a new function to export spectra in MGF format.