Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

support for undefined taxa and for percentages of seqlengths #121

Open
wants to merge 2 commits into
base: master
Choose a base branch
from

Conversation

lskatz
Copy link

@lskatz lskatz commented Apr 17, 2018

Hi @DerrickWood , I was having issues with my personal database where I edited my own taxonomy and where I needed to assess contigs instead of reads. Where I messed up the taxonomy, I created a better warning message and added a category "UNKNOWN" to the report.

Also, instead of proportions of the taxonomy being rated by seq count, I changed it to seq lengths. This adds more meaning to me in the report and avoids skewing the report from smaller contigs.

Even if my revisions are taken as suggestions, thank you for taking the time to look it over.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant