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Pull requests: DerrickWood/kraken

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Pull requests list

Update rsync_from_ncbi.pl
#145 opened Jul 22, 2020 by jrherr Loading…
support for undefined taxa and for percentages of seqlengths
#121 opened Apr 17, 2018 by lskatz Loading…
Install kraken to $PREFIX/libexec and symlink from $PREFIX/bin
#90 opened Oct 25, 2017 by yesimon Loading…
Add --db-index, --db-file, --taxonomy, --db-pipe for piped db files
#89 opened Oct 24, 2017 by yesimon Loading…
8
Make build db compatible for OS X
#58 opened Feb 23, 2017 by yesimon Loading…
1
Fixed human genome downloading and added auto-masking feature using dustmasker
#57 opened Feb 22, 2017 by taltman Loading…
6
modified scripts/download_genomic_library.sh
#54 opened Oct 12, 2016 by kemin711 Loading…
Compile when omp.h is absent
#31 opened Oct 4, 2015 by BenLangmead Loading…
Skip empty FASTA sequences, and allow to force taxids
#27 opened Jul 10, 2015 by fbreitwieser Loading…
Set default shrink block offset
#23 opened May 26, 2015 by andrewjpage Loading…
Print header with kraken version and database
#22 opened May 26, 2015 by andrewjpage Loading…
Add support for the mouse (GRCm38) library
#21 opened May 22, 2015 by andrewjpage Loading…
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