Symbolic links confuse Import particle coordinates function

[bforsbe]

Originally reported by: Matt Iadanza (Bitbucket: attamatti, GitHub: attamatti)

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I made a symbolic link to an old micrographs folder that contains my micrographs and particle coordinate files.

When I imported the coordinate stars rather than putting the files in:
Import/job001/micrographs/

it put them in:
Import/job001/path/to/symbolic/link/micrographsmicrographs/

although the inupt coordinates file still lists them as in Import/job001/micrographs/

I don't imagine people would normally be doing this for coordinate files, but we do routinely use symbolic links to avoid making multiple copies of our micrographs.

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• Bitbucket: https://bitbucket.org/tcblab/relion2-beta/issue/15

[bforsbe]

Original comment by Sjors Scheres (Bitbucket: scheres, GitHub: scheres):

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I just fixed this. It will be updated in the next beta-version

[bforsbe]

Original comment by Sjors Scheres (Bitbucket: scheres, GitHub: scheres):

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fixed.