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ClinVar filter #52

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AdrianBZG opened this issue Jul 9, 2018 · 4 comments
Closed

ClinVar filter #52

AdrianBZG opened this issue Jul 9, 2018 · 4 comments
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@AdrianBZG AdrianBZG added this to the Milestone 3 (August 6) milestone Jul 9, 2018
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AdrianBZG commented Jul 10, 2018 •
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Example query given by @rachellyne:

<query name="" model="genomic" view="Gene.symbol Gene.name Gene.primaryIdentifier Gene.secondaryIdentifier Gene.organism.name Gene.alleles.primaryIdentifier Gene.alleles.organism.name Gene.alleles.clinicalSignificance Gene.alleles.alternate Gene.alleles.type Gene.alleles.reference Gene.alleles.diseases.identifier Gene.alleles.diseases.name" longDescription="For a gene, show alleles and any associated diseases. ClinVar data." sortOrder="Gene.symbol asc">
<constraint path="Gene" op="LOOKUP" value="PPARG" extraValue="H. sapiens"/>
</query>

AdrianBZG added a commit that referenced this issue Jul 10, 2018
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Endpoint to fetch clinical significance values #52
a16dd04
AdrianBZG added a commit that referenced this issue Jul 10, 2018
@AdrianBZG
Endpoint to fetch alleles type values #52
a72a811
AdrianBZG added a commit that referenced this issue Jul 10, 2018
@AdrianBZG
ClinVar filter typeaheads are working #52
34a5e43
AdrianBZG added a commit that referenced this issue Jul 10, 2018
@AdrianBZG
ClinVar filter is now working #52
f74a7db
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AdrianBZG commented Jul 10, 2018 •
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@yochannah @rachellyne This filter is now working 👍 :

http://im-browser-prototype.herokuapp.com/

clinvar1

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Looks great and worked! Could you may be put an example in each box, as you have done for other filters? e.g. Pathogenic for clinical significance and Insertion for type.

AdrianBZG added a commit that referenced this issue Jul 11, 2018
@AdrianBZG
Add examples to ClinVar and Pathway filters #52
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@rachellyne Done! 😉

AdrianBZG added a commit that referenced this issue Mar 6, 2020
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Migrates to gulp 4 (#52)
ced4aae 
Migrates to gulp 4
AdrianBZG pushed a commit that referenced this issue Mar 6, 2020
@dmahajan980
Restored the dependencies' version and gulpfile used before commit #52.
7e6b336
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@rachellyne @AdrianBZG